ENST00000288350.8 LCA5L

Information
Transcript ID
ENST00000288350.8
Genome
hg19
Position
chr21:40,777,654-40,817,704
Strand
-
CDS length
2,013
Amino acid length
671
Gene symbol
LCA5L
Gene type
protein-coding
Gene description
lebercilin LCA5 like
Gene Entrez Gene ID
150082
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 40,777,654 40,778,538
10 40,781,905 40,782,022
9 40,782,190 40,782,293
8 40,783,644 40,783,728
7 40,792,632 40,792,769
6 40,794,902 40,795,416
5 40,800,098 40,800,429
4 40,801,057 40,801,137
3 40,807,346 40,807,499
2 40,816,061 40,816,127
1 40,817,651 40,817,704
CDS
Exon number Type Start Stop
11 CDS 40,777,808 40,778,538
10 CDS 40,781,905 40,782,022
9 CDS 40,782,190 40,782,293
8 CDS 40,783,644 40,783,728
7 CDS 40,792,632 40,792,769
6 CDS 40,794,902 40,795,416
5 CDS 40,800,098 40,800,419
Other genome
Genome Chromosome Start End Links
hg38 chr21 39,405,728 39,445,778 Link
CDS sequence
ATGTCTTTGGCTGATCTAACAAAAACAAATATAGATGAGCATTTCTTCGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCACGGAACAGTAATGCTTCCAATAAGAGTGTTGATTATAGCAGATCTCAGTGCTCCTGTGGAAGTTTAAGTTCTCAGTATGATTATTCAGAAGACTTTCTCTGTGATTGTTCAGAAAAGGCTATTAATAGAAATTATTTAAAGCAGCCTGTGGTAAAAGAAAAGGAGAAGAAAAAGTATAATGTTTCTAAAATCTCCCAATCTAAAGGCCAGAAGGAAATATCAGTTGAAAAAAAGCACACCTGGAATGCATCACTCTTTAATTCTCAAATCCATATGATTGCCCAAAGAAGAGATGCTATGGCTCATCGAATACTCTCAGCAAGGCTTCATAAAATTAAAGGACTAAAAAATGAATTAGCTGATATGCATCATAAATTGGAAGCCATCCTTACAGAAAACCAATTTTTGAAACAACTTCAGCTTAGGCATTTGAAAGCTATAGGAAAATATGAGAATTCACAAAATAATCTACCTCAAATTATGGCTAAACATCAGAATGAAGTAAAAAATTTAAGGCAACTACTTAGGAAATCCCAGGAAAAGGAAAGAACTCTATCTAGGAAACTTAGAGAAACTGACAGCCAGTTACTGAAGACTAAAGATATCTTGCAGGCACTGCAGAAACTTTCTGAAGACAAAAACCTTGCAGAAAGGGAAGAACTCACTCATAAATTATCTATTATCACAACAAAAATGGACGCAAATGACAAAAAAATACAGAGCTTGGAAAAACAACTGAGGTTGAACTGCAGAGCCTTTAGCCGGCAGCTGGCTATTGAGACTCGGAAGACTTTAGCAGCTCAGACAGCTACCAAGACTCTGCAGGTGGAAGTAAAACACCTTCAACAAAAACTTAAGGAAAAGGATCGTGAGCTTGAAATTAAAAACATCTATAGTCATCGAATACTTAAAAATTTACATGACACAGAGGACTATCCAAAAGTTTCTTCAACAAAATCAGTCCAAGCAGACAGAAAAATTTTGCCATTCACAAGTATGAGACACCAGGGAACCCAAAAATCAGATGTTCCACCTTTGACAACTAAGGGTAAAAAGGCAACAGGAAACATCGATCATAAAGAAAAATCAACTGAAATAAATCATGAAATTCCTCACTGTGTGAATAAACTACCAAAGCAAGAGGATTCTAAGAGAAAATATGAAGATTTATCAGGGGAAGAGAAACATTTGGAAGTCCAAATACTGCTGGAGAATACTGGAAGACAAAAAGACAAAAAAGAAGACCAAGAAAAGAAAAACATTTTTGTGAAAGAAGAGCAAGAACTACCACCAAAAATAATTGAAGTTATTCATCCTGAAAGAGAAAGCAATCAAGAAGATGTTCTAGTAAGAGAAAAGTTTAAAAGAAGCATGCAGAGAAATGGTGTGGATGACACACTTGGCAAAGGCACTGCTCCCTACACGAAAGGCCCCCTCAGACAAAGAAGACATTACTCATTCACAGAAGCAACTGAAAACCTGCATCATGGGCTTCCTGCTTCAGGGGGGCCAGCCAATGCCGGCAACATGAGGTACAGTCATAGTACAGGCAAGCATCTCAGTAACAGAGAGGAAATGGAGCTAGAGCATTCTGACAGTGGGTATGAGCCCTCATTTGGTAAGTCTTCCAGAATAAAAGTGAAGGATACAACTTTCAGAGATAAGAAAAGCAGTCTCATGGAAGAACTCTTTGGATCAGGCTATGTCTTGAAAACTGACCAATCAAGTCCTGGTGTTGCAAAAGGCTCAGAGGAGCCTTTGCAAAGTAAGGAGTCGCATCCCCTGCCTCCCAGTCAGGCCTCCACCAGCCATGCTTTCGGAGACTCTAAAGTAACTGTGGTAAATTCTATTAAGCCATCGTCACCTACAGAAGGAAAAAGAAAAATAATTATTTAA
Amino sequence
MSLADLTKTNIDEHFFGVALENNRRSAACKRSPGTGDFSRNSNASNKSVDYSRSQCSCGSLSSQYDYSEDFLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEISVEKKHTWNASLFNSQIHMIAQRRDAMAHRILSARLHKIKGLKNELADMHHKLEAILTENQFLKQLQLRHLKAIGKYENSQNNLPQIMAKHQNEVKNLRQLLRKSQEKERTLSRKLRETDSQLLKTKDILQALQKLSEDKNLAEREELTHKLSIITTKMDANDKKIQSLEKQLRLNCRAFSRQLAIETRKTLAAQTATKTLQVEVKHLQQKLKEKDRELEIKNIYSHRILKNLHDTEDYPKVSSTKSVQADRKILPFTSMRHQGTQKSDVPPLTTKGKKATGNIDHKEKSTEINHEIPHCVNKLPKQEDSKRKYEDLSGEEKHLEVQILLENTGRQKDKKEDQEKKNIFVKEEQELPPKIIEVIHPERESNQEDVLVREKFKRSMQRNGVDDTLGKGTAPYTKGPLRQRRHYSFTEATENLHHGLPASGGPANAGNMRYSHSTGKHLSNREEMELEHSDSGYEPSFGKSSRIKVKDTTFRDKKSSLMEELFGSGYVLKTDQSSPGVAKGSEEPLQSKESHPLPPSQASTSHAFGDSKVTVVNSIKPSSPTEGKRKIII*