ENST00000372466.8 NUP62CL
Information
- Transcript ID
- ENST00000372466.8
- Genome
- hg38
- Position
- chrX:107,123,427-107,206,433
- Strand
- -
- CDS length
- 555
- Amino acid length
- 185
- Gene symbol
- NUP62CL
- Gene type
- protein-coding
- Gene description
- nucleoporin 62 C-terminal like
- Gene Entrez Gene ID
- 54830
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 107,123,427 | 107,124,332 |
| 8 | 107,147,743 | 107,147,809 |
| 7 | 107,153,172 | 107,153,306 |
| 6 | 107,153,454 | 107,153,503 |
| 5 | 107,154,096 | 107,154,246 |
| 4 | 107,167,649 | 107,167,784 |
| 3 | 107,175,089 | 107,175,193 |
| 2 | 107,193,029 | 107,193,072 |
| 1 | 107,206,273 | 107,206,433 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 107,147,785 | 107,147,809 |
| 7 | CDS | 107,153,172 | 107,153,306 |
| 6 | CDS | 107,153,454 | 107,153,503 |
| 5 | CDS | 107,154,096 | 107,154,246 |
| 4 | CDS | 107,167,649 | 107,167,784 |
| 3 | CDS | 107,175,089 | 107,175,146 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 106,366,657 | 106,449,663 | Link |
CDS sequence
ATGCAGTTTACCTCAATATCAAATTCTTTGACCTCCACTGCTGCTATTGGGCTCTCATTTACAACTTCAACGACTACCACCGCCACTTTCACCACCAACACTACTACCACAATCACCAGTGGCTTTACTGTGAACCAAAACCAACTGTTATCAAGAGGGTTTGAAAACCTTGTACCTTATACTTCAACTGTTAGTGTAGTAGCAACTCCTGTGATGACATATGGTCATCTGGAGGGTCTTATAAATGAGTGGAACCTTGAGCTGGAAGATCAAGAGAAGTACTTTCTTCTCCAGGCCACTCAGGTCAATGCTTGGGACCATACATTGATTGAGAATGGTGAGATGATTCGTATTTTACATGGAGAAGTGAACAAAGTGAAACTGGATCAGAAAAGATTGGAACAAGAATTGGATTTTATCCTGTCACAGCAGCAGGAACTAGAATTTCTGTTGACTTATTTAGAGGAGTCTACGCGTGACCAGAGTGGACTTCATTATCTGCAGGATGCAGATGAGGAGCATGTGGAGATCTCCACCAGATCTGCAGAATTCTGA
Amino sequence
MQFTSISNSLTSTAAIGLSFTTSTTTTATFTTNTTTTITSGFTVNQNQLLSRGFENLVPYTSTVSVVATPVMTYGHLEGLINEWNLELEDQEKYFLLQATQVNAWDHTLIENGEMIRILHGEVNKVKLDQKRLEQELDFILSQQQELEFLLTYLEESTRDQSGLHYLQDADEEHVEISTRSAEF*