ENST00000308906.6 LKAAEAR1
Information
- Transcript ID
- ENST00000308906.6
- Genome
- hg19
- Position
- chr20:62,714,733-62,715,712
- Strand
- -
- CDS length
- 723
- Amino acid length
- 241
- Gene symbol
- LKAAEAR1
- Gene type
- protein-coding
- Gene description
- LKAAEAR motif containing 1
- Gene Entrez Gene ID
- 198437
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 2 | 62,714,733 | 62,715,058 |
| 1 | 62,715,171 | 62,715,712 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 62,714,738 | 62,715,058 |
| 1 | CDS | 62,715,171 | 62,715,572 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 64,083,380 | 64,084,359 | Link |
CDS sequence
ATGCCGCCGCCAGCGAAGGAGGGCGGGCGCAAGGGCCCGCGGGAGCGAAGCGGGAAGAGCGCGCCAGGCACGGCGCAGGGTGAGGAGCGTGCCAAGGGGGCGCCCGCGACAGAGCCCCCCAAGCCGGGCTGGGCCCTGACGCCGCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGTGGGCGCGGCGGCCTCCACCTTCCCGTGCGGGTCGGTGGAACCGGGGTACCGCATGCCCGACCCGCGCCCGTGGACGCAGTCGCTCGAGCTGCCCGCCGAGCGCCAGAACCGGCTCCTCGGCGTCCTCAAGGCAGCGGAGGCCCGCGGGCGAGTCCGCGCCCTGCGGCTGCGCTACACCCGCATGCGGGCCGAGGAGATCGCGCTGCTCATCCAGCGGCAGAAGTCCGCGCGCGCCGCCATCCGGCTGGAGCTGTTCCTGCCGCCGCAGCTGAAGCCCGCGCGGATCCCGGACCCCCTGGACCGCCAAGAGGTGCAGACAAGCCCCGGTAGGGGCGGGGAAAGGGGAGGGGCCCTGCCCGCCTCCGCACACGCCGGACCCCAGCCTCTCTCCCCGGCAGCGGAGGCGCGTGGAGACCATCCTGGAGGAGAACGTGGATGGCACCATCTTCCCGCGGTGACGGCGACTGAGAGTGTGCGACGCGCCCCAGCCTCCCACATAAAGTTATAA
Amino sequence
MPPPAKEGGRKGPRERSGKSAPGTAQGEERAKGAPATEPPKPGWALTPQGLAAMLPAQRHRHLLFGDLLEDVGAAASTFPCGSVEPGYRMPDPRPWTQSLELPAERQNRLLGVLKAAEARGRVRALRLRYTRMRAEEIALLIQRQKSARAAIRLELFLPPQLKPARIPDPLDRQEVQTSPGRGGERGGALPASAHAGPQPLSPAAEARGDHPGGERGWHHLPAVTATESVRRAPASHIKL*