ENST00000622789.5 ARFRP1
Information
- Transcript ID
- ENST00000622789.5
- Genome
- hg19
- Position
- chr20:62,330,000-62,339,328
- Strand
- -
- CDS length
- 606
- Amino acid length
- 202
- Gene symbol
- ARFRP1
- Gene type
- protein-coding
- Gene description
- ADP ribosylation factor related protein 1
- Gene Entrez Gene ID
- 10139
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 62,330,000 | 62,331,882 |
| 7 | 62,331,954 | 62,332,054 |
| 6 | 62,333,182 | 62,333,252 |
| 5 | 62,333,488 | 62,333,569 |
| 4 | 62,337,709 | 62,337,791 |
| 3 | 62,338,003 | 62,338,090 |
| 2 | 62,338,351 | 62,338,449 |
| 1 | 62,339,219 | 62,339,328 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 62,331,795 | 62,331,882 |
| 7 | CDS | 62,331,954 | 62,332,054 |
| 6 | CDS | 62,333,182 | 62,333,252 |
| 5 | CDS | 62,333,488 | 62,333,569 |
| 4 | CDS | 62,337,709 | 62,337,791 |
| 3 | CDS | 62,338,003 | 62,338,090 |
| 2 | CDS | 62,338,351 | 62,338,443 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 63,698,647 | 63,707,976 | Link |
CDS sequence
ATGTACACGCTGCTGTCGGGCTTGTACAAGTACATGTTTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCCTGGACAATGCTGGGAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATTTAACAAGAACTACAAGGGGATGAGTCTATCCAAAATCACCACCACCGTGGGCCTAAACATCGGCACTGTGGATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAAGTATTATGCGGAGTGTCACGGCGTCATCTACGTCATTGACTCCACCGACGAGGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCGGTGTCCCCGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAG
Amino sequence
MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTGKGVREGIEWMVKCVVRNVHRPPRQRDIT*