ENST00000331758.8 SS18L1

Information
Transcript ID
ENST00000331758.8
Genome
hg19
Position
chr20:60,718,825-60,757,570
Strand
+
CDS length
1,191
Amino acid length
397
Gene symbol
SS18L1
Gene type
protein-coding
Gene description
SS18L1 subunit of BAF chromatin remodeling complex
Gene Entrez Gene ID
26039
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 60,718,825 60,718,945
2 60,733,728 60,733,804
3 60,734,933 60,735,017
4 60,736,492 60,736,636
5 60,737,808 60,737,987
6 60,738,514 60,738,678
7 60,739,201 60,739,302
8 60,740,478 60,740,570
9 60,747,738 60,747,857
10 60,749,573 60,749,700
11 60,754,238 60,757,570
CDS
Exon number Type Start Stop
1 CDS 60,718,877 60,718,945
2 CDS 60,733,728 60,733,804
3 CDS 60,734,933 60,735,017
4 CDS 60,736,492 60,736,636
5 CDS 60,737,808 60,737,987
6 CDS 60,738,514 60,738,678
7 CDS 60,739,201 60,739,302
8 CDS 60,740,478 60,740,570
9 CDS 60,747,738 60,747,857
10 CDS 60,749,573 60,749,700
11 CDS 60,754,238 60,754,264
Other genome
Genome Chromosome Start End Links
hg38 chr20 62,143,769 62,182,514 Link
CDS sequence
ATGTCCGTGGCCTTCGCGTCTGCCCGGCCAAGAGGCAAAGGGGAGGTTACGCAGCAAACCATCCAGAAGATGCTGGACGAGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGCAAGGGCAAGACGGCCGAGTGCACGCAGTACCAGCAGATCCTGCACCGGAACCTGGTATACCTGGCCACGATCGCAGACTCCAACCAGAACATGCAGTCCCTGCTTCCTGCCCCGCCCACGCAGAACATGAACCTGGGCCCTGGAGCCCTGACTCAGAGCGGCTCCAGCCAGGGCCTGCACTCTCAGGGCAGCCTGAGTGACGCCATCAGCACGGGCCTGCCACCCTCCTCCCTCCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACGTGTCCATGCAGCAGACGGCGCCTAACACGCTGCCCACCACCTCCATGAGCATCTCTGGGCCCGGCTACAGCCACGCGGGACCCGCCTCGCAGGGCGTCCCCATGCAGGGGCAAGGCACCATCGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCCAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAGCAGCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGCCCTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAGGAGGAGTACTATGGCGAGCAGTACAGCCACAGCCAGGGCGCCGCGGAGCCCATGGGCCAGCAGTACTACCCCGACGGCCATGGCGATTACGCCTACCAGCAGTCATCCTACACGGAGCAGAGCTACGACCGGTCCTTCGAGGAGTCCACGCAGCACTACTATGAGGGGGGAAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACCCCGGGCAGCAGCAGGGCTACGGGTCTGCCCAGGGAGCCCCGTCACAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGAAGCTACCGAGCACCGCAGACAGCGCCGTCTGCCCAGCAGCAGCGGCCCTACGGCTATGAACAGGGCCAGTATGGAAATTACCAGCAGTAA
Amino sequence
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ*