ENST00000541461.5 PHACTR3

Information
Transcript ID
ENST00000541461.5
Genome
hg19
Position
chr20:58,203,664-58,422,764
Strand
+
CDS length
1,557
Amino acid length
519
Gene symbol
PHACTR3
Gene type
protein-coding
Gene description
phosphatase and actin regulator 3
Gene Entrez Gene ID
116154
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 58,203,664 58,203,871
2 58,318,162 58,318,323
3 58,322,813 58,322,890
4 58,330,237 58,330,419
5 58,342,241 58,342,450
6 58,348,334 58,348,508
7 58,349,298 58,349,545
8 58,381,096 58,381,249
9 58,411,560 58,411,615
10 58,415,424 58,415,485
11 58,416,450 58,416,590
12 58,420,244 58,420,320
13 58,422,170 58,422,764
CDS
Exon number Type Start Stop
2 CDS 58,318,167 58,318,323
3 CDS 58,322,813 58,322,890
4 CDS 58,330,237 58,330,419
5 CDS 58,342,241 58,342,450
6 CDS 58,348,334 58,348,508
7 CDS 58,349,298 58,349,545
8 CDS 58,381,096 58,381,249
9 CDS 58,411,560 58,411,615
10 CDS 58,415,424 58,415,485
11 CDS 58,416,450 58,416,590
12 CDS 58,420,244 58,420,320
13 CDS 58,422,170 58,422,185
Other genome
Genome Chromosome Start End Links
hg38 chr20 59,628,609 59,847,709 Link
CDS sequence
ATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGAGGAAAAAGAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTCATCAAGAAGGGGCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGGTCTCCCTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGATCCGTGGGCCAGCTCCCCAGCCCCCCACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAAAAAATGTCACAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGAGAACCTGATCATAAATTCTGAACTCAAAGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCTGAACGACTCCATTATTTCTGGAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTGATGAAGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAAGAGCTGGAGAGAAGAAATATCTTGAAACAAAGGAATGATCAGACAGAGCAGGAAGAAAGAAGAGAAATCAAGCAAAGATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGATGAATTAAGAGACAGAAAAATTCTGATACGATTCAGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATGACAGGAGGGCAGACAAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAAATGAGTACAAAAGTAATGAAATGGAGGTACATGCATCAAGCAAGCACTTGACAAGATTCCACAGGCCATAG
Amino sequence
MDQTPPARPEYLVSGIRTPPVRRNSKLATLGRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREELIKKGLLEMMEQDAESKTCNPDGGPRSVQSEPPTPKSETLTSEDAQPGSPLATGTDQVSLDKPLSSAAHLDDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLPTPPPKASSKTTKNVTGQATLFQASSMKSADPSLRGQLSTPTGSPHLTTVHRPLPPSRVIEELHRALATKHRQDSFQGRESKGSPKKRLDVRLSRTSSVERGKEREEAWSFDGALENKRTAAKESEENKENLIINSELKDDLLLYQDEEALNDSIISGTLPRKCKKELLAVKLRNRPSKQELEDRNIFPRRTDEERQEIRQQIEMKLSKRLSQRPAVEELERRNILKQRNDQTEQEERREIKQRLTRKLNQRPTVDELRDRKILIRFSDYVEVAKAQDYDRRADKPWTRLSAADKAAIRKELNEYKSNEMEVHASSKHLTRFHRP*