ENST00000652272.2 NELFCD

Information
Transcript ID
ENST00000652272.2
Genome
hg19
Position
chr20:57,556,311-57,570,168
Strand
+
CDS length
1,746
Amino acid length
582
Gene symbol
NELFCD
Gene type
protein-coding
Gene description
negative elongation factor complex member C/D
Gene Entrez Gene ID
51497
Variants

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Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,556,311 57,556,424
2 57,561,148 57,561,263
3 57,561,809 57,561,918
4 57,562,763 57,562,872
5 57,563,969 57,564,076
6 57,564,543 57,564,695
7 57,564,913 57,565,043
8 57,565,965 57,566,130
9 57,566,367 57,566,501
10 57,566,936 57,567,075
11 57,568,053 57,568,167
12 57,568,504 57,568,599
13 57,568,679 57,568,819
14 57,569,165 57,569,294
15 57,569,697 57,570,168
CDS
Exon number Type Start Stop
1 CDS 57,556,365 57,556,424
2 CDS 57,561,148 57,561,263
3 CDS 57,561,809 57,561,918
4 CDS 57,562,763 57,562,872
5 CDS 57,563,969 57,564,076
6 CDS 57,564,543 57,564,695
7 CDS 57,564,913 57,565,043
8 CDS 57,565,965 57,566,130
9 CDS 57,566,367 57,566,501
10 CDS 57,566,936 57,567,075
11 CDS 57,568,053 57,568,167
12 CDS 57,568,504 57,568,599
13 CDS 57,568,679 57,568,819
14 CDS 57,569,165 57,569,294
15 CDS 57,569,697 57,569,731
Other genome
Genome Chromosome Start End Links
hg38 chr20 58,981,256 58,995,113 Link
CDS sequence
ATGGACGAGGACTACTACGGGAGCGCGGCCGAGTGGGGCGACGAGGCTGACGGCGGCCAGCAGGAGGATGATTCTGGAGAAGGAGAGGATGATGCGGAGGTTCAGCAAGAATGCCTGCATAAATTTTCCACCCGGGATTATATCATGGAACCCTCCATCTTCAACACTCTGAAGAGGTATTTTCAGGCAGGAGGGTCTCCAGAGAATGTTATCCAGCTCTTATCTGAAAACTACACCGCTGTGGCCCAGACTGTGAACCTGCTGGCCGAGTGGCTCATTCAGACAGGTGTTGAGCCAGTGCAGGTTCAGGAAACTGTGGAAAATCACTTGAAGAGTTTGCTGATCAAACATTTTGACCCCCGCAAAGCAGATTCTATTTTTACTGAAGAAGGAGAGACCCCAGCGTGGCTGGAACAGATGATTGCACATACCACGTGGCGGGACCTTTTTTATAAACTGGCTGAAGCCCATCCAGACTGTTTGATGCTGAACTTCACCGTTAAGCTTATTTCTGACGCAGGGTACCAGGGGGAGATCACCAGTGTGTCCACAGCATGCCAGCAGCTAGAAGTGTTCTCGAGAGTGCTCCGGACCTCTCTAGCTACAATTTTAGATGGAGGAGAAGAAAACCTTGAAAAAAATCTCCCTGAGTTTGCCAAGATGGTGTGCCACGGGGAGCACACGTACCTGTTTGCCCAGGCCATGATGTCCGTGCTGGCCCAGGAGGAGCAGGGGGGCTCCGCTGTGCGCAGGATCGCCCAGGAAGTGCAGCGCTTTGCCCAGGAGAAAGGTCATGACGCCAGTCAGATCACACTAGCCTTGGGCACAGCTGCCTCCTACCCCAGGGCCTGCCAGGCTCTCGGGGCCATGCTGTCCAAAGGAGCCCTGAACCCTGCTGACATCACCGTCCTGTTCAAGATGTTCACAAGCATGGACCCTCCTCCGGTTGAACTTATCCGCGTTCCAGCCTTCCTGGACCTGTTCATGCAGTCACTCTTTAAACCAGGGGCTCGGATCAACCAGGACCACAAGCACAAATACATCCACATCTTGGCGTACGCAGCAAGCGTGGTTGAGACCTGGAAGAAGAACAAGCGAGTGAGCATCAATAAAGATGAGCTGAAGTCAACGTCAAAAGCTGTCGAAACCGTTCACAATTTGTGTTGCAACGAGAACAAAGGGGCCTCTGAACTAGTGGCAGAATTGAGCACACTTTATCAGTGTATTAGGTTTCCAGTGGTAGCAATGGGTGTGCTGAAGTGGGTGGATTGGACTGTATCAGAACCAAGGTACTTTCAGCTGCAGACTGACCATACCCCTGTCCACCTGGCGTTGCTGGATGAGATCAGCACCTGCCACCAGCTCCTGCACCCCCAGGTCCTGCAGCTGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGACGTGATGGAGCAGCTTGAGTTGAAGAAGACACTGCTGGACAGGATGGTTCACCTGCTGAGTCGAGGTTATGTACTTCCTGTTGTCAGTTACATCCGAAAGTGTCTGGAGAAGCTGGACACTGACATTTCACTCATTCGCTATTTTGTCACTGAGGTGCTGGACGTCATTGCTCCTCCTTATACCTCTGACTTCGTGCAACTTTTCCTCCCCATCCTGGAGAATGACAGCATCGCAGGTACCATCAAAACGGAAGGCGAGCATGACCCTGTGACGGAGTTTATAGCTCACTGCAAATCTAACTTCATCATGGTGAACTAA
Amino sequence
MDEDYYGSAAEWGDEADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGARINQDHKHKYIHILAYAASVVETWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFIMVN*