ENST00000616202.4 SLC12A5
Information
- Transcript ID
- ENST00000616202.4
- Genome
- hg19
- Position
- chr20:44,657,821-44,688,789
- Strand
- +
- CDS length
- 870
- Amino acid length
- 290
- Gene symbol
- SLC12A5
- Gene type
- protein-coding
- Gene description
- solute carrier family 12 member 5
- Gene Entrez Gene ID
- 57468
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 44,657,821 | 44,658,035 |
| 2 | 44,663,587 | 44,663,681 |
| 3 | 44,664,043 | 44,664,174 |
| 4 | 44,664,416 | 44,664,562 |
| 5 | 44,665,380 | 44,665,434 |
| 6 | 44,665,894 | 44,666,024 |
| 7 | 44,687,120 | 44,688,789 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 44,657,984 | 44,658,035 |
| 2 | CDS | 44,663,587 | 44,663,681 |
| 3 | CDS | 44,664,043 | 44,664,174 |
| 4 | CDS | 44,664,416 | 44,664,562 |
| 5 | CDS | 44,665,380 | 44,665,434 |
| 6 | CDS | 44,665,894 | 44,666,024 |
| 7 | CDS | 44,687,120 | 44,687,377 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 46,029,182 | 46,060,150 | Link |
CDS sequence
ATGCTAAACAACCTGACGGACTGCGAGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTTCATCAACAGCACCGACACAGAGAAGGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTTTGAGGAGGAGATGGACACCAGCCCTATGGTGTCCTCCTTGCTCAGTGGCCTGGCCAACTACACCAACCTGCCCCAGGGAAGTAGGGAGCATGAAGAGGCAGAAAACAATGAGGGTGGAAAAAAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTCATGGGCGTGTACCTGCCGTGCCTGCAGAACATCTTTGGCGTCATCCTCTTCCTGCGGCTCACCTGGGTGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTACGATGCTCACGGCCATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTGCCTGCTGGTGGCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAGAGTTTGGGGGTGCCGTGGGCCTCTGCTTCTACCTGGGCACTACCTTTGCAGGAGCCATGTACATCCTGGGCACCATCGAAATCCTGCTGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGCCCCGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGA
Amino sequence
MLNNLTDCEDGDGGANPGDGNPKESSPFINSTDTEKGKEYDGKNMALFEEEMDTSPMVSSLLSGLANYTNLPQGSREHEEAENNEGGKKKPVQAPRMGTFMGVYLPCLQNIFGVILFLRLTWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEILLRREQPLLIGSYASWGQDRGGVLLKRKKPRGPRPTEEAPPRCLRWGAGVSPQSACRLLPVSHGSSPKTEIVELEGAPSPEFPPWDK*