ENST00000616933.4 SLC12A5

Information
Transcript ID
ENST00000616933.4
Genome
hg19
Position
chr20:44,657,821-44,688,789
Strand
+
CDS length
789
Amino acid length
263
Gene symbol
SLC12A5
Gene type
protein-coding
Gene description
solute carrier family 12 member 5
Gene Entrez Gene ID
57468
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 44,657,821 44,658,035
2 44,663,587 44,663,681
3 44,664,043 44,664,174
4 44,664,416 44,664,562
5 44,665,380 44,665,434
6 44,665,894 44,666,024
7 44,666,863 44,666,969
8 44,669,012 44,669,253
9 44,669,968 44,670,179
10 44,671,792 44,671,962
11 44,672,272 44,672,370
12 44,672,515 44,672,572
13 44,673,605 44,673,779
14 44,674,517 44,674,635
15 44,674,977 44,675,075
16 44,676,093 44,676,212
17 44,676,620 44,676,724
18 44,678,261 44,678,429
19 44,680,314 44,680,509
20 44,681,596 44,681,765
21 44,682,217 44,682,348
22 44,683,555 44,683,662
23 44,684,789 44,684,911
24 44,685,004 44,685,203
25 44,685,536 44,685,550
26 44,685,809 44,685,942
27 44,686,153 44,688,789
CDS
Exon number Type Start Stop
1 CDS 44,657,984 44,658,035
2 CDS 44,663,587 44,663,681
3 CDS 44,664,043 44,664,174
4 CDS 44,664,416 44,664,562
5 CDS 44,665,380 44,665,434
6 CDS 44,665,894 44,666,024
7 CDS 44,666,863 44,666,969
8 CDS 44,669,012 44,669,081
Other genome
Genome Chromosome Start End Links
hg38 chr20 46,029,182 46,060,150 Link
CDS sequence
ATGCTAAACAACCTGACGGACTGCGAGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTTCATCAACAGCACCGACACAGAGAAGGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTTTGAGGAGGAGATGGACACCAGCCCTATGGTGTCCTCCTTGCTCAGTGGCCTGGCCAACTACACCAACCTGCCCCAGGGAAGTAGGGAGCATGAAGAGGCAGAAAACAATGAGGGTGGAAAAAAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTCATGGGCGTGTACCTGCCGTGCCTGCAGAACATCTTTGGCGTCATCCTCTTCCTGCGGCTCACCTGGGTGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTACGATGCTCACGGCCATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTGCCTGCTGGTGGCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAGAGTTTGGGGGTGCCGTGGGCCTCTGCTTCTACCTGGGCACTACCTTTGCAGGAGCCATGTACATCCTGGGCACCATCGAAATCCTGCTGAGTCTCACTCTGTTGCCCAGGCTGGAGGGCAGTGGTGCAGTCACTGACAGCCTCGACTTCCCAGGTTCAAATGATCCCCCCCACCAGTTCAGCCTCCCAAGTAGCTGGCTTACCTCTTCCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGGGAGGCAGCAGCCATGCTGA
Amino sequence
MLNNLTDCEDGDGGANPGDGNPKESSPFINSTDTEKGKEYDGKNMALFEEEMDTSPMVSSLLSGLANYTNLPQGSREHEEAENNEGGKKKPVQAPRMGTFMGVYLPCLQNIFGVILFLRLTWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEILLSLTLLPRLEGSGAVTDSLDFPGSNDPPHQFSLPSSWLTSSQPWPSSRQKMPVGRQQPC*