ENST00000458187.5 SYS1-DBNDD2
Information
- Transcript ID
- ENST00000458187.5
- Genome
- hg19
- Position
- chr20:43,992,142-44,038,637
- Strand
- +
- CDS length
- 294
- Amino acid length
- 98
- Gene symbol
- SYS1-DBNDD2
- Gene type
- ncRNA
- Gene description
- SYS1-DBNDD2 readthrough (NMD candidate)
- Gene Entrez Gene ID
- 767557
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 43,992,142 | 43,992,333 |
| 2 | 43,994,259 | 43,994,326 |
| 3 | 44,028,330 | 44,028,391 |
| 4 | 44,037,100 | 44,037,246 |
| 5 | 44,037,441 | 44,037,578 |
| 6 | 44,038,572 | 44,038,637 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 43,992,172 | 43,992,333 |
| 2 | CDS | 43,994,259 | 43,994,326 |
| 3 | CDS | 44,028,330 | 44,028,391 |
| 4 | CDS | 44,037,100 | 44,037,101 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 45,363,502 | 45,409,997 | Link |
CDS sequence
ATGGCGGGTCAGTTCCGCAGCTACGTGTGGGACCCGCTGCTGATCCTGTCGCAGATCGTCCTCATGCAGACCGTGTATTACGGCTCGCTGGGCCTGTGGCTGGCGCTGGTGGACGGGCTAGTGCGAAGCAGCCCCTCGCTGGACCAGATGTTCGACGCCGAGATCCTGGGCTTTTCCACCCCTCCAGGCCGGCTCTCCATGATGTCCTTCATCCTCAACGCCCTCACCTGGCACTTCTCCTTGCTGCTGCCACATGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGA
Amino sequence
MAGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTWHFSLLLPHEEGRVCFPFHHD*