ENST00000343694.8 RBPJL

Information
Transcript ID
ENST00000343694.8
Genome
hg19
Position
chr20:43,935,480-43,946,464
Strand
+
CDS length
1,554
Amino acid length
518
Gene symbol
RBPJL
Gene type
protein-coding
Gene description
recombination signal binding protein for immunoglobulin kappa J region like
Gene Entrez Gene ID
11317
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 43,935,480 43,935,584
2 43,936,783 43,936,891
3 43,938,207 43,938,332
4 43,940,229 43,940,299
5 43,940,479 43,940,594
6 43,940,861 43,941,035
7 43,942,108 43,942,245
8 43,942,675 43,942,784
9 43,943,053 43,943,205
10 43,944,827 43,944,982
11 43,945,117 43,945,220
12 43,945,326 43,946,464
CDS
Exon number Type Start Stop
1 CDS 43,935,563 43,935,584
2 CDS 43,936,783 43,936,891
3 CDS 43,938,207 43,938,332
4 CDS 43,940,229 43,940,299
5 CDS 43,940,479 43,940,594
6 CDS 43,940,861 43,941,035
7 CDS 43,942,108 43,942,245
8 CDS 43,942,675 43,942,784
9 CDS 43,943,053 43,943,205
10 CDS 43,944,827 43,944,982
11 CDS 43,945,117 43,945,220
12 CDS 43,945,326 43,945,599
Other genome
Genome Chromosome Start End Links
hg38 chr20 45,306,840 45,317,824 Link
CDS sequence
ATGGACCCCGCAGGGGCAGCAGACCCCTCAGTGCCTCCCAATCCTTTGACTCACCTGAGCCTGCAGGACAGATCAGAGATGCAGCTGCAGAGCGAAGCCGACAGGCGGAGCCTCCCGGGCACTTGGACCAGGTCATCCCCAGAGCACACCACCATTCTGAGGGGAGGCGTGCGCAGGTGCCTGCAGCAACAGTGTGAACAGACTGTGCGGATCCTGCATGCCAAGGTGGCCCAGAAATCATACGGAAATGAGAAGCGGTTCTTCTGCCCCCCGCCCTGTGTCTACCTCTCGGGGCCTGGCTGGAGGGTGAAGCCAGGGCAGGATCAAGCTCACCAGGCGGGGGAAACGGGGCCCACGGTCTGCGGTTACATGGGACTGGACAGCGCGTCCGGCAGCGCCACTGAGACGCAGAAGCTGAATTTCGAGCAGCAGCCGGACTCCAGGGAATTCGGCTGCGCCAAGACCCTGTACATCTCAGATGCAGACAAGAGGAAGCACTTTCGGCTGGTGCTGCGGCTGGTGCTGCGCGGGGGCCGGGAGCTGGGTACCTTCCACAGCCGCCTTATCAAGGTCATCTCGAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACACCGATCTGTGCATATCCTCCGGCTCAAAGGTCTCCCTCTTCAACCGCCTGCGCTCTCAGACGGTCTCCACACGCTACCTCTCTGTGGAGGATGGGGCCTTTGTGGCCAGTGCACGACAGTGGGCTGCCTTCACGCTCCACCTGGCTGATGGGCACTCTGCCCAAGGAGACTTCCCACCGCGAGAGGGCTACGTTCGCTATGGCTCCCTGGTGCAGCTCGTCTGCACGGTCACCGGCATCACACTACCTCCCATGATCATCCGTAAAGTAGCAAAACAGTGTGCGCTCCTTGATGTGGATGAGCCCATCTCCCAGCTGCACAAGTGTGCATTCCAGTTTCCAGGCAGTCCCCCAGGAGGGGGTGGCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGCAATTTCAGGCCTCTCCCTGCCCCAAGGAGGCGAACAGGGCTCTGCTTAACGACAGCTCTTGCTGGACCATCATCGGCACCGAGTCGGTGGAATTTTCCTTCAGCACCAGCCTGGCGTGTACCCTGGAGCCGGTCACTCCGGTGCCTCTCATCAGCACCCTAGAGCTGAGCGGCGGGGGCGACGTGGCCACGCTGGAGCTCCACGGAGAGAACTTCCACGCGGGGCTCAAGGTGTGGTTTGGGGACGTGGAGGCAGAAACCATGTACAGGAGCCCGCGGTCCCTGGTGTGCGTGGTGCCGGACGTGGCGGCCTTCTGCAGCGACTGGCGCTGGCTGCGCGCTCCCATCACAATCCCCATGAGCCTGGTGCGCGCCGACGGGCTCTTCTACCCTAGTGCCTTCTCCTTCACCTACACCCCGGAATACAGCGTGCGGCCGGGTCACCCCGGCGTCCCCGAGCCCGCCACCGACGCCGACGCGCTCCTGGAGAGCATCCATCAGGAGTTCACGCGCACCAACTTCCACCTCTTCATCCAGACTTAG
Amino sequence
MDPAGAADPSVPPNPLTHLSLQDRSEMQLQSEADRRSLPGTWTRSSPEHTTILRGGVRRCLQQQCEQTVRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPGQDQAHQAGETGPTVCGYMGLDSASGSATETQKLNFEQQPDSREFGCAKTLYISDADKRKHFRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTDLCISSGSKVSLFNRLRSQTVSTRYLSVEDGAFVASARQWAAFTLHLADGHSAQGDFPPREGYVRYGSLVQLVCTVTGITLPPMIIRKVAKQCALLDVDEPISQLHKCAFQFPGSPPGGGGTYLCLATEKVVQFQASPCPKEANRALLNDSSCWTIIGTESVEFSFSTSLACTLEPVTPVPLISTLELSGGGDVATLELHGENFHAGLKVWFGDVEAETMYRSPRSLVCVVPDVAAFCSDWRWLRAPITIPMSLVRADGLFYPSAFSFTYTPEYSVRPGHPGVPEPATDADALLESIHQEFTRTNFHLFIQT*