ENST00000217073.7 PABPC1L

Information
Transcript ID
ENST00000217073.7
Genome
hg19
Position
chr20:43,538,701-43,567,957
Strand
+
CDS length
1,860
Amino acid length
620
Gene symbol
PABPC1L
Gene type
protein-coding
Gene description
poly(A) binding protein cytoplasmic 1 like
Gene Entrez Gene ID
80336
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 43,538,701 43,538,977
2 43,541,301 43,541,494
3 43,545,397 43,545,512
4 43,547,547 43,547,686
5 43,547,824 43,547,918
6 43,550,235 43,550,372
7 43,552,802 43,552,897
8 43,559,101 43,559,367
9 43,560,983 43,561,073
10 43,561,698 43,561,826
11 43,564,032 43,564,138
12 43,565,278 43,565,371
13 43,566,702 43,566,832
14 43,567,315 43,567,389
15 43,567,767 43,567,957
CDS
Exon number Type Start Stop
1 CDS 43,538,785 43,538,977
2 CDS 43,541,301 43,541,494
3 CDS 43,545,397 43,545,512
4 CDS 43,547,547 43,547,686
5 CDS 43,547,824 43,547,918
6 CDS 43,550,235 43,550,372
7 CDS 43,552,802 43,552,897
8 CDS 43,559,101 43,559,367
9 CDS 43,560,983 43,561,073
10 CDS 43,561,698 43,561,826
11 CDS 43,564,032 43,564,138
12 CDS 43,565,278 43,565,371
13 CDS 43,566,702 43,566,832
14 CDS 43,567,315 43,567,383
Other genome
Genome Chromosome Start End Links
hg38 chr20 44,910,060 44,939,316 Link
CDS sequence
ATGAACGCCAGCGGTTCTGGCTACCCGCTTGCCTCGCTTTACGTGGGCGATCTGCACCCCGACGTGACCGAGGCCATGCTCTATGAGAAGTTCTCTCCCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCGATGTAGCCACCCGGCGCTCGCTGGGCTACGCCTACATCAACTTCCAGCAGCCCGCGGACGCGGAGCGGGCACTGGACACAATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCATGTGGTCCCAGCGAGACCCAGGACTTCGCAAGTCAGGTGTGGGCAACATCTTCATCAAGAACCTGGAGGACTCCATTGACAACAAGGCTTTATATGATACCTTCTCCACCTTTGGGAACATCCTCTCTTGCAAGGTGGCGTGTGACGAGCATGGCTCCCGGGGTTTCGGCTTTGTCCATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCTGAATGACCGCAAAGTCTTTGTGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGGAGCTGGGGGCGCGGGCCCTGGAGTTCACCAACATCTACGTGAAGAACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCTGAGTGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCCGTGGTCCATATGAACGGGAAGGAGGTGAGCGGGCGGCTGCTGTACGCGGGCCGGGCCCAAAAGCGCGTGGAGCGGCAGAATGAACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCGTTACCAGGGTGTGAACTTGTATGTGAAGAATCTGGACGACTCCATTGATGACGACAAACTGAGGAAAGAGTTCTCTCCCTATGGAGTAATTACCAGTGCGAAGGTGATGACAGAGGGTGGCCACAGCAAGGGGTTTGGCTTTGTGTGTTTTTCCTCCCCAGAAGAGGCGACAAAGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTGCCATGCCCCAGCCTCCAGCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGCCACCTAGACCTTCCTCTGCCTACCCTCCAGGTGCCTCAATGGTCCGGCCACCAGTTGTGCCTCGGCGCCCCCCGGCCCACATCAGCAGTGTCAGGCAGGCCTCCACCCAGGTGCCACGCACGGTGCCTCATACCCAGAGAGTAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACACCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGAGCCCCTGACCGCGTCCATGCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGATGATTGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGCATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAGATAGACGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGA
Amino sequence
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSSAYPPGASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVLQAHQAMEQPKAYMH*