ENST00000378961.9 CHGB
Information
- Transcript ID
- ENST00000378961.9
- Genome
- hg19
- Position
- chr20:5,892,156-5,905,999
- Strand
- +
- CDS length
- 2,034
- Amino acid length
- 678
- Gene symbol
- CHGB
- Gene type
- protein-coding
- Gene description
- chromogranin B
- Gene Entrez Gene ID
- 1114
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 5,892,156 | 5,892,328 |
| 2 | 5,896,972 | 5,897,018 |
| 3 | 5,897,472 | 5,897,565 |
| 4 | 5,902,981 | 5,904,746 |
| 5 | 5,905,618 | 5,905,999 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 5,892,280 | 5,892,328 |
| 2 | CDS | 5,896,972 | 5,897,018 |
| 3 | CDS | 5,897,472 | 5,897,565 |
| 4 | CDS | 5,902,981 | 5,904,746 |
| 5 | CDS | 5,905,618 | 5,905,695 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 5,911,510 | 5,925,353 | Link |
CDS sequence
ATGCAGCCAACGCTGCTTCTCAGCCTCCTGGGAGCCGTGGGGCTGGCGGCTGTCAATTCCATGCCAGTGGATAACAGGAACCACAATGAAGGAATGGTGACTCGCTGCATCATTGAGGTCCTCTCAAATGCCTTGTCGAAGTCCAGCGCTCCACCCATCACCCCTGAGTGCCGCCAAGTCCTGAAGACGAGTAGAAAAGACGTCAAAGACAAAGAGACAACTGAAAATGAAAACACAAAGTTTGAAGTAAGATTGTTAAGAGACCCAGCTGATGCCTCGGAAGCCCACGAGTCCTCCAGCAGGGGAGAGGCAGGAGCCCCAGGGGAGGAGGACATCCAAGGCCCAACAAAGGCAGACACAGAGAAATGGGCAGAGGGAGGCGGGCACAGCCGAGAGCGAGCGGATGAGCCCCAGTGGAGCCTCTATCCCTCCGACAGCCAAGTCTCTGAAGAAGTGAAGACACGCCATTCTGAGAAGAGCCAGAGAGAGGATGAGGAGGAGGAGGAGGGAGAGAACTATCAAAAAGGGGAGCGAGGGGAAGATAGCAGTGAAGAGAAACACCTTGAAGAGCCAGGAGAGACACAAAACGCTTTTCTCAATGAAAGAAAGCAGGCTTCAGCTATAAAAAAAGAGGAGTTAGTGGCCAGATCGGAAACACATGCTGCCGGGCATTCTCAGGAGAAGACACATAGCCGAGAGAAGAGTAGCCAGGAGAGTGGAGAGGAGACAGGGAGCCAGGAGAATCACCCCCAGGAGTCTAAAGGCCAACCCCGAAGCCAGGAAGAATCTGAGGAAGGTGAGGAAGATGCCACCTCTGAGGTGGACAAACGACGCACGAGGCCCAGACACCACCACGGGAGGAGCAGGCCCGACAGGTCCTCTCAAGGAGGGAGTCTTCCCTCTGAGGAAAAGGGACACCCCCAGGAGGAATCTGAGGAGTCAAACGTCAGCATGGCCAGTTTAGGGGAAAAGAGGGACCACCATTCAACCCACTACAGGGCTTCAGAGGAAGAACCTGAATATGGAGAAGAAATAAAGGGTTATCCAGGCGTCCAGGCCCCTGAGGACCTGGAGTGGGAGCGCTATAGGGGCAGAGGAAGTGAAGAATACAGGGCTCCAAGACCTCAGAGTGAGGAGAGTTGGGATGAGGAGGACAAGAGAAACTACCCCAGCTTAGAGCTTGATAAGATGGCACATGGATATGGTGAAGAAAGTGAGGAAGAGAGGGGCCTTGAGCCGGGAAAGGGACGCCATCACAGAGGCAGGGGAGGGGAGCCACGTGCCTATTTCATGTCTGACACCAGAGAAGAGAAAAGGTTCTTGGGTGAAGGACACCACCGTGTCCAAGAAAACCAGATGGACAAGGCAAGGAGGCATCCACAAGGTGCGTGGAAAGAGCTGGACAGAAATTATCTCAACTACGGTGAGGAAGGAGCCCCAGGGAAGTGGCAGCAGCAGGGAGACCTGCAGGACACTAAAGAAAACAGGGAGGAAGCTAGGTTTCAAGATAAACAATATAGCTCCCATCACACAGCTGAAAAGAGGAAGAGATTAGGGGAACTGTTCAACCCATACTACGACCCTCTCCAGTGGAAGAGCAGCCATTTTGAAAGAAGAGACAACATGAATGACAATTTTCTCGAGGGTGAGGAGGAAAATGAGCTGACCTTGAACGAGAAGAATTTCTTCCCAGAATACAACTATGACTGGTGGGAGAAAAAGCCCTTCTCTGAGGATGTGAACTGGGGGTATGAGAAGAGAAACCTCGCCAGGGTCCCCAAGCTGGACCTGAAAAGGCAATATGACAGGGTGGCCCAACTGGACCAGCTCCTTCACTACAGGAAGAAGTCAGCTGAGTTTCCAGACTTCTATGATTCTGAGGAGCCGGTGAGCACCCACCAGGAGGCAGAAAATGAAAAGGACAGGGCTGACCAGACAGTCCTGACAGAGGACGAGAAAAAAGAACTCGAAAACTTGGCTGCAATGGATTTGGAACTACAGAAGATAGCTGAGAAATTCAGCCAAAGGGGCTGA
Amino sequence
MQPTLLLSLLGAVGLAAVNSMPVDNRNHNEGMVTRCIIEVLSNALSKSSAPPITPECRQVLKTSRKDVKDKETTENENTKFEVRLLRDPADASEAHESSSRGEAGAPGEEDIQGPTKADTEKWAEGGGHSRERADEPQWSLYPSDSQVSEEVKTRHSEKSQREDEEEEEGENYQKGERGEDSSEEKHLEEPGETQNAFLNERKQASAIKKEELVARSETHAAGHSQEKTHSREKSSQESGEETGSQENHPQESKGQPRSQEESEEGEEDATSEVDKRRTRPRHHHGRSRPDRSSQGGSLPSEEKGHPQEESEESNVSMASLGEKRDHHSTHYRASEEEPEYGEEIKGYPGVQAPEDLEWERYRGRGSEEYRAPRPQSEESWDEEDKRNYPSLELDKMAHGYGEESEEERGLEPGKGRHHRGRGGEPRAYFMSDTREEKRFLGEGHHRVQENQMDKARRHPQGAWKELDRNYLNYGEEGAPGKWQQQGDLQDTKENREEARFQDKQYSSHHTAEKRKRLGELFNPYYDPLQWKSSHFERRDNMNDNFLEGEEENELTLNEKNFFPEYNYDWWEKKPFSEDVNWGYEKRNLARVPKLDLKRQYDRVAQLDQLLHYRKKSAEFPDFYDSEEPVSTHQEAENEKDRADQTVLTEDEKKELENLAAMDLELQKIAEKFSQRG*