ENST00000381867.6 SNPH

Information
Transcript ID
ENST00000381867.6
Genome
hg19
Position
chr20:1,246,938-1,289,971
Strand
+
CDS length
1,617
Amino acid length
539
Gene symbol
SNPH
Gene type
protein-coding
Gene description
syntaphilin
Gene Entrez Gene ID
9751
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 1,246,938 1,247,041
2 1,247,298 1,247,404
3 1,275,595 1,275,622
4 1,276,420 1,277,065
5 1,277,789 1,277,896
6 1,281,206 1,281,355
7 1,285,522 1,289,971
CDS
Exon number Type Start Stop
4 CDS 1,276,884 1,277,065
5 CDS 1,277,789 1,277,896
6 CDS 1,281,206 1,281,355
7 CDS 1,285,522 1,286,698
Other genome
Genome Chromosome Start End Links
hg38 chr20 1,266,294 1,309,327 Link
CDS sequence
ATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTGGCCTGGCCCGGCCCTTTCTGCGGGCCCCCCAACCCGCCCTCTCTCCTCAGCCCCCGGGATACCGCCCATCCCACCCCTTACTCGGACCCACAGCCTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACCTCTGCTGGATCACGCAGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCTACGGCACCTCTTCGCTCAGCAGCAGCAGCAATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAATACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCTGACCCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCTGAAGGACACACAGGACCGGCTCCAGGACCGGGACACAGAGATTGATGACCTGAAGACGCAGCTGTCACGCATGCAGGAGGACTGGATTGAGGAGGAGTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAGGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCTGCCCGCTCCCTCACCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCTGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCAGAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGTGACAGTGGGTGATGAGCTAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGCTGGCTGTGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCCAGCGGGCGGCGGCTCCCAGCTCTGA
Amino sequence
MPGSGPSERMTWPGPALSAGPPTRPLSSAPGIPPIPPLTRTHSLMAMSLPGSRRTSAGSRRRTSPPVSVRDAYGTSSLSSSSNSGSYKGSDSSPTPRRSMKYTLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLKARLKDTQDRLQDRDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNNLIDKDKGLQKYFVDINIQNKKLETLLHSMEVAQNGMAKEDGTGESAGGSPARSLTRSSTYTKLSDPAVCGDRQPGDPSSGSAEDGADSGFAAADDTLSRTDALEASSLLSSGVDCGTEETSLHSSFGLGPRFPASNTYEKLLCGMEAGVQASCMQERAIQTDFVQYQPDLDTILEKVTQAQVCGTDPESGDRCPELDAHPSGPRDPNSAVVVTVGDELEAPEPITRGPTPQRPGANPNPGQSVSVVCPMEEEEEAAVAEKEPKSYWSRHYIVDLLAVVVPAVPTVAWLCRSQRRQGQPIYNISSLLRGCCTVALHSIRRISCRSLSQPSPSPAGGGSQL*