ENST00000588751.5 NLRP13

Information
Transcript ID
ENST00000588751.5
Genome
hg19
Position
chr19:56,403,065-56,443,702
Strand
-
CDS length
3,111
Amino acid length
1,037
Gene symbol
NLRP13
Gene type
protein-coding
Gene description
NLR family pyrin domain containing 13
Gene Entrez Gene ID
126204
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 56,403,065 56,403,487
11 56,407,358 56,407,485
10 56,410,136 56,410,303
9 56,413,401 56,413,571
8 56,416,308 56,416,478
7 56,419,158 56,419,322
6 56,421,929 56,422,099
5 56,423,072 56,424,659
4 56,435,280 56,435,345
3 56,435,956 56,436,024
2 56,436,333 56,436,401
1 56,443,359 56,443,702
CDS
Exon number Type Start Stop
12 CDS 56,403,462 56,403,487
11 CDS 56,407,358 56,407,485
10 CDS 56,410,136 56,410,303
9 CDS 56,413,401 56,413,571
8 CDS 56,416,308 56,416,478
7 CDS 56,419,158 56,419,322
6 CDS 56,421,929 56,422,099
5 CDS 56,423,072 56,424,659
4 CDS 56,435,280 56,435,345
3 CDS 56,435,956 56,436,024
2 CDS 56,436,333 56,436,401
1 CDS 56,443,359 56,443,677
Other genome
Genome Chromosome Start End Links
hg38 chr19 55,891,699 55,932,336 Link
CDS sequence
ATGAACTTTTCTGTAATCACCTGCCCCAACGGTGGTACCAACCAAGGGCTTCTGCCTTACCTGATGGCCCTGGATCAGTATCAGCTGGAGGAATTCAAGCTTTGCTTGGAACCCCAGCAGCTGATGGACTTCTGGTCGGCCCCCCAGGGGCACTTCCCGCGTATCCCCTGGGCAAACTTGAGAGCTGCCGACCCTTTGAATCTGTCCTTTCTTTTGGATGAACACTTCCCAAAAGGTCAGGCATGGAAAGTGGTCCTCGGCATCTTCCAGACAATGAATCTGACCTCACTGTGTGAGAAAGTTAGAGCCGAGATGAAAGAGAATGTGCAGACCCAAGAGCTGCAAGATCCAACCCAGGAAGATCTAGAGATGCTAGAAGCAGCAGCAGGGAATATGCAGACCCAGGGATGCCAAGATCCAAACCAAGAAGAACTAGACGAGCTAGAAGAAGAAACAGGGAATGTACAGGCCCAGGGATGCCAAGATCCAAACCAAGAAGAACCAGAGATGCTAGAGGAAGCAGACCACAGAAGAAAATACAGAGAGAACATGAAGGCTGAACTACTGGAGACATGGGACAACATCAGTTGGCCTAAAGACCACGTATATATCCGTAATACATCAAAGGACGAACATGAGGAACTGCAGCGCCTACTGGATCCTAATAGGACTAGAGCCCAGGCCCAGACGATAGTCTTGGTGGGGAGGGCAGGGGTTGGGAAGACCACCTTGGCAATGCAGGCTATGCTGCACTGGGCAAATGGAGTTCTCTTTCAGCAAAGGTTCTCCTATGTTTTCTATCTCAGCTGCCATAAAATAAGGTACATGAAGGAAACTACCTTTGCTGAATTGATTTCTTTGGATTGGCCCGATTTTGATGCCCCCATTGAAGAGTTCATGTCTCAACCAGAGAAGCTCCTGTTTATTATTGATGGCTTTGAGGAAATAATCATATCTGAGTCACGCTCTGAGAGCTTGGATGATGGCTCGCCATGTACAGACTGGTACCAGGAGCTCCCAGTGACCAAAATCCTACACAGCTTGTTGAAGAAAGAATTGGTTCCCCTGGCTACCTTACTGATCACGATCAAGACCTGGTTTGTGAGAGATCTTAAGGCCTCATTAGTGAATCCATGCTTTGTACAAATTACAGGGTTCACAGGGGACGACCTACGGGTATATTTCATGAGACACTTTGATGACTCAAGTGAAGTTGAGAAAATCCTGCAGCAGCTAAGAAAAAACGAAACTCTCTTTCATTCCTGCAGTGCCCCCATGGTGTGTTGGACCGTATGTTCCTGTCTGAAGCAGCCGAAGGTGAGGTATTACGATCTCCAGTCAATCACTCAGACTACCACCAGTCTGTATGCCTATTTTTTCTCCAACTTGTTCTCCACAGCAGAGGTAGATTTGGCAGATGACAGCTGGCCAGGACAATGGAGGGCCCTCTGCAGTCTGGCCATAGAAGGGCTGTGGTCTATGAACTTCACGTTTAACAAAGAAGACACTGAGATCGAGGGCCTGGAAGTGCCTTTCATTGATTCTCTCTACGAGTTCAATATTCTTCAAAAGATCAATGACTGTGGGGGTTGCACTACTTTCACCCACCTAAGTTTCCAGGAGTTTTTTGCAGCCATGTCCTTTGTGCTAGAGGAACCTAGAGAATTCCCTCCCCATTCCACAAAGCCACAAGAGATGAAGATGTTACTGCAACACGTCTTGCTTGACAAAGAAGCCTACTGGACTCCAGTGGTTCTGTTCTTCTTTGGTCTTTTAAATAAAAACATAGCAAGAGAACTGGAAGATACTTTGCATTGTAAAATATCTCCCAGGGTAATGGAGGAATTATTAAAGTGGGGAGAAGAGTTAGGTAAGGCTGAAAGTGCCTCTCTCCAATTTCACATTCTACGACTTTTTCACTGCCTACACGAGTCCCAGGAGGAAGACTTCACAAAGAAGATGTTGGGTCGTATCTTTGAAGTTGACCTTAATATTTTGGAGGACGAAGAACTCCAAGCTTCTTCATTTTGCCTAAAGCACTGTAAAAGGTTAAATAAGCTAAGGCTTTCTGTTAGCAGTCACATCCTTGAAAGGGACTTGGAAATTCTGGAGACAAGCAAGTTTGATTCCAGGATGCACGCATGGAACAGCATTTGCTCTACGTTGGTCACAAATGAGAATCTGCATGAGCTAGACCTGAGTAACAGCAAACTTCATGCTTCCTCTGTGAAGGGTCTCTGTCTTGCACTGAAAAATCCAAGATGCAAAGTCCAGAAACTGACGTGCAAATCGGTAACTCCTGAGTGGGTTCTGCAGGACCTCATTATTGCCCTTCAGGGTAACAGCAAGCTGACCCATCTGAACTTCAGCTCTAACAAGCTGGGAATGACTGTCCCCCTGATTCTTAAAGCTTTGAGACACTCAGCTTGCAACCTCAAGTATCTGTGCCTGGAGAAATGCAACTTGTCGGCAGCCAGCTGTCAGGACCTAGCCTTGTTTCTCACCAGCATCCAACACGTAACTCGATTGTGCCTGGGATTTAATCGGCTCCAAGATGATGGCATAAAGCTATTGTGTGCGGCCCTGACTCACCCCAAGTGTGCCTTAGAGAGACTGGAGCTCTGGTTTTGCCAGCTGGCAGCACCCGCTTGCAAGCACTTGTCAGATGCTCTCCTGCAGAACAGGAGCCTGACACACCTGAATCTGAGCAAGAACAGCCTGAGAGACGAGGGAGTCAAGTTCCTGTGTGAGGCCTTGGGTCGCCCAGATGGTAACCTGCAGAGCCTGAATTTGTCAGGTTGTTCTTTCACAAGAGAGGGCTGTGGAGAGCTGGCTAATGCCCTCAGCCATAATCATAATGTGAAAATCTTGGATTTGGGAGAAAATGATCTTCAGGATGATGGAGTGAAGCTACTGTGTGAGGCTCTGAAACCACATCGTGCATTGCACACACTTGGGTTGGCGAAATGCAATCTGACAACTGCTTGCTGCCAGCATCTCTTCTCTGTTCTCAGCAGCAGTAAGAGCCTGGTCAATCTGAACCTTCTAGGCAATGAATTGGATACTGATGGTGTCAAGATGCTATGCTTCAAAAAGACCTGCACAATGTAG
Amino sequence
MNFSVITCPNGGTNQGLLPYLMALDQYQLEEFKLCLEPQQLMDFWSAPQGHFPRIPWANLRAADPLNLSFLLDEHFPKGQAWKVVLGIFQTMNLTSLCEKVRAEMKENVQTQELQDPTQEDLEMLEAAAGNMQTQGCQDPNQEELDELEEETGNVQAQGCQDPNQEEPEMLEEADHRRKYRENMKAELLETWDNISWPKDHVYIRNTSKDEHEELQRLLDPNRTRAQAQTIVLVGRAGVGKTTLAMQAMLHWANGVLFQQRFSYVFYLSCHKIRYMKETTFAELISLDWPDFDAPIEEFMSQPEKLLFIIDGFEEIIISESRSESLDDGSPCTDWYQELPVTKILHSLLKKELVPLATLLITIKTWFVRDLKASLVNPCFVQITGFTGDDLRVYFMRHFDDSSEVEKILQQLRKNETLFHSCSAPMVCWTVCSCLKQPKVRYYDLQSITQTTTSLYAYFFSNLFSTAEVDLADDSWPGQWRALCSLAIEGLWSMNFTFNKEDTEIEGLEVPFIDSLYEFNILQKINDCGGCTTFTHLSFQEFFAAMSFVLEEPREFPPHSTKPQEMKMLLQHVLLDKEAYWTPVVLFFFGLLNKNIARELEDTLHCKISPRVMEELLKWGEELGKAESASLQFHILRLFHCLHESQEEDFTKKMLGRIFEVDLNILEDEELQASSFCLKHCKRLNKLRLSVSSHILERDLEILETSKFDSRMHAWNSICSTLVTNENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKLTCKSVTPEWVLQDLIIALQGNSKLTHLNFSSNKLGMTVPLILKALRHSACNLKYLCLEKCNLSAASCQDLALFLTSIQHVTRLCLGFNRLQDDGIKLLCAALTHPKCALERLELWFCQLAAPACKHLSDALLQNRSLTHLNLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGELANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHTLGLAKCNLTTACCQHLFSVLSSSKSLVNLNLLGNELDTDGVKMLCFKKTCTM*