ENST00000416792.2 SHISA7

Information
Transcript ID
ENST00000416792.2
Genome
hg19
Position
chr19:55,943,343-55,954,644
Strand
-
CDS length
1,683
Amino acid length
561
Gene symbol
SHISA7
Gene type
protein-coding
Gene description
shisa family member 7
Gene Entrez Gene ID
729956
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 55,943,343 55,945,163
4 55,948,972 55,949,121
3 55,949,928 55,949,993
2 55,951,978 55,952,132
1 55,953,560 55,954,644
CDS
Exon number Type Start Stop
5 CDS 55,944,523 55,945,163
4 CDS 55,948,972 55,949,121
3 CDS 55,949,928 55,949,993
2 CDS 55,951,978 55,952,132
1 CDS 55,953,560 55,954,230
Other genome
Genome Chromosome Start End Links
hg38 chr19 55,431,976 55,443,277 Link
CDS sequence
ATGCCGGCCCTCCTGCTCCTCGTACTCCTGGCCTCTAGCGCCGGCCAGGCCAGGGCGCGCCCGTCCAACGCCACGAGCGCCGAGCCCGCGGGCCCGCTGCCCGCCCTGCTGGCGCACCTGCGGCGCCTGACCGGGGCGCTGACGGGCGGCGGGGGCGCGGCGAGCCCAGGCGCCAACGGCACCAGGACCGGCCCCGCGGGCGGGGCGGGCGCGGCGGCCCGGGCGCCCCCTCCCGCCGAGCTCTGCCACGGCTACTACGATGTCATGGGCCAGTACGACGCCACCTTCAACTGCAGCACCGGCTCCTACCGCTTCTGCTGTGGCACCTGCCACTACCGCTTCTGCTGTGAGCACCGTCACATGCGCCTGGCGCAGGCCTCCTGCTCCAACTACGACACGCCGCGCTGGGCCACCACGCCGCCGCCGCTAGCTGGGGGCGCCGGGGGCGCTGGGGGTGCGGGCGGGGGGCCAGGGCCCGGCCAGGCCGGGTGGTTGGAAGGGGGCCGGACTGGGGGTGCCGGGGGCCGCGGGGGCGAGGGCCCCGGGGGCAGCACAGCCTACGTCGTGTGCGGGGTCATCAGCTTCGCCCTGGCCGTGGGCGTCGGCGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTGCGCCCCGGGCGCACCGGGATATCAACGTGCCCAGAGCTCTGGTGGACATTCTGAGACATCAGGCGGGGCCTGGGACCCGCCCGGACCGGGCCCGAAGCAGCTCCCTGACCCCGGGGATCGGCGGTCCCGACAGCATGCCCCCCAGGACGCCCAAGAACCTCTACAACACCGTGAAGACCCCCAACCTCGATAATCTGCACCACAGCTACCTGCACCTCAACGTCAACAGCCCCAAGCACCACGCCGCCACACTGGACTGGCGAGCCTTGCCGCCGCCCAGCCCCTCCTTGCACTACTCCACGCTGTCCTGCTCTCGGTCCTTCCACAACCTCTCGCATCTGCCCCCGTCCTACGAGGCTGCCGTGAAATCCGAGCTGAACCGCTACTCTTCCCTCAAGAGGCTGGCCGAGAAGGATCTGGACGAGGCCTACCTGAAGCGCCGGCCCCTGGAATTGCCCCGCGGCACGCTGCCCCTGCACGCGCTGCGGCGGCCGGGCACGGGGGGCGGCTATCGCATGGAGGCCTGGGGCGGCCCAGAGGAGCTGGGCCTGGCGCCCGCGCCCAACCCCCGGCGGGTCATGTCCCAGGAGCACCTGCTGGGCGATGGTGGCCGTTCGCGCTACGAGTTCACGCTGCCGCGCGCGCGCCTGGTGTCGCAGGAGCACCTGCTGCTGTCCTCGCCCGAGGCCCTGCGCCAGAGTCGCGAGCACCTGCTGTCGCCCCCGCGCAGCCCCGCGCTGCCCCCCGACCCCACCGCCCGGGCCAGCCTGGCCGCCTCGCACTCCAACCTGCTGCTGGGGCCCGGGGGGCCCCCAACACCGCTGCGCGGGCTGCCGCCACCGTCCAGCCTGCACGCCCACCACCACCACGCCCTGCACGGCTCGCCGCAGCCGGCCTGGATGTCCGACGCCGGCGGGGGCGGGGGCACACTGGCCCGCAGGCCGCCCTTCCAGCGCCAGGGCACGCTGGAGCAGCTGCAGTTCATCCCGGGCCACCACCTGCCCCAGCACCTGCGCACGGCCAGCAAGAACGAGGTGACTGTCTGA
Amino sequence
MPALLLLVLLASSAGQARARPSNATSAEPAGPLPALLAHLRRLTGALTGGGGAASPGANGTRTGPAGGAGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRTGGAGGRGGEGPGGSTAYVVCGVISFALAVGVGAKVAFSKASRAPRAHRDINVPRALVDILRHQAGPGTRPDRARSSSLTPGIGGPDSMPPRTPKNLYNTVKTPNLDNLHHSYLHLNVNSPKHHAATLDWRALPPPSPSLHYSTLSCSRSFHNLSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRPLELPRGTLPLHALRRPGTGGGYRMEAWGGPEELGLAPAPNPRRVMSQEHLLGDGGRSRYEFTLPRARLVSQEHLLLSSPEALRQSREHLLSPPRSPALPPDPTARASLAASHSNLLLGPGGPPTPLRGLPPPSSLHAHHHHALHGSPQPAWMSDAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV*