ENST00000376325.10 SHISA7

Information
Transcript ID
ENST00000376325.10
Genome
hg19
Position
chr19:55,940,107-55,954,667
Strand
-
CDS length
1,617
Amino acid length
539
Gene symbol
SHISA7
Gene type
protein-coding
Gene description
shisa family member 7
Gene Entrez Gene ID
729956
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 55,940,107 55,945,163
3 55,948,972 55,949,121
2 55,951,978 55,952,132
1 55,953,560 55,954,667
CDS
Exon number Type Start Stop
4 CDS 55,944,523 55,945,163
3 CDS 55,948,972 55,949,121
2 CDS 55,951,978 55,952,132
1 CDS 55,953,560 55,954,230
Other genome
Genome Chromosome Start End Links
hg38 chr19 55,428,740 55,443,300 Link
CDS sequence
ATGCCGGCCCTCCTGCTCCTCGTACTCCTGGCCTCTAGCGCCGGCCAGGCCAGGGCGCGCCCGTCCAACGCCACGAGCGCCGAGCCCGCGGGCCCGCTGCCCGCCCTGCTGGCGCACCTGCGGCGCCTGACCGGGGCGCTGACGGGCGGCGGGGGCGCGGCGAGCCCAGGCGCCAACGGCACCAGGACCGGCCCCGCGGGCGGGGCGGGCGCGGCGGCCCGGGCGCCCCCTCCCGCCGAGCTCTGCCACGGCTACTACGATGTCATGGGCCAGTACGACGCCACCTTCAACTGCAGCACCGGCTCCTACCGCTTCTGCTGTGGCACCTGCCACTACCGCTTCTGCTGTGAGCACCGTCACATGCGCCTGGCGCAGGCCTCCTGCTCCAACTACGACACGCCGCGCTGGGCCACCACGCCGCCGCCGCTAGCTGGGGGCGCCGGGGGCGCTGGGGGTGCGGGCGGGGGGCCAGGGCCCGGCCAGGCCGGGTGGTTGGAAGGGGGCCGGACTGGGGGTGCCGGGGGCCGCGGGGGCGAGGGCCCCGGGGGCAGCACAGCCTACGTCGTGTGCGGGGTCATCAGCTTCGCCCTGGCCGTGGGCGTCGGCGCCAAAGTGGCCTTCAGCAAGGCGTCCCGTGCGCCCCGGGCGCACCGGGATATCAACGTGCCCAGAGCTCTGGTGGACATTCTGAGACATCAGGCGGGGCCTGGGACCCGCCCGGACCGGGCCCGAAGCAGCTCCCTGACCCCGGGGATCGGCGGTCCCGACAGCATGCCCCCCAGGACGCCCAAGAACCTCTACAACACCGTGAAGACCCCCAACCTCGACTGGCGAGCCTTGCCGCCGCCCAGCCCCTCCTTGCACTACTCCACGCTGTCCTGCTCTCGGTCCTTCCACAACCTCTCGCATCTGCCCCCGTCCTACGAGGCTGCCGTGAAATCCGAGCTGAACCGCTACTCTTCCCTCAAGAGGCTGGCCGAGAAGGATCTGGACGAGGCCTACCTGAAGCGCCGGCCCCTGGAATTGCCCCGCGGCACGCTGCCCCTGCACGCGCTGCGGCGGCCGGGCACGGGGGGCGGCTATCGCATGGAGGCCTGGGGCGGCCCAGAGGAGCTGGGCCTGGCGCCCGCGCCCAACCCCCGGCGGGTCATGTCCCAGGAGCACCTGCTGGGCGATGGTGGCCGTTCGCGCTACGAGTTCACGCTGCCGCGCGCGCGCCTGGTGTCGCAGGAGCACCTGCTGCTGTCCTCGCCCGAGGCCCTGCGCCAGAGTCGCGAGCACCTGCTGTCGCCCCCGCGCAGCCCCGCGCTGCCCCCCGACCCCACCGCCCGGGCCAGCCTGGCCGCCTCGCACTCCAACCTGCTGCTGGGGCCCGGGGGGCCCCCAACACCGCTGCGCGGGCTGCCGCCACCGTCCAGCCTGCACGCCCACCACCACCACGCCCTGCACGGCTCGCCGCAGCCGGCCTGGATGTCCGACGCCGGCGGGGGCGGGGGCACACTGGCCCGCAGGCCGCCCTTCCAGCGCCAGGGCACGCTGGAGCAGCTGCAGTTCATCCCGGGCCACCACCTGCCCCAGCACCTGCGCACGGCCAGCAAGAACGAGGTGACTGTCTGA
Amino sequence
MPALLLLVLLASSAGQARARPSNATSAEPAGPLPALLAHLRRLTGALTGGGGAASPGANGTRTGPAGGAGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRTGGAGGRGGEGPGGSTAYVVCGVISFALAVGVGAKVAFSKASRAPRAHRDINVPRALVDILRHQAGPGTRPDRARSSSLTPGIGGPDSMPPRTPKNLYNTVKTPNLDWRALPPPSPSLHYSTLSCSRSFHNLSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRPLELPRGTLPLHALRRPGTGGGYRMEAWGGPEELGLAPAPNPRRVMSQEHLLGDGGRSRYEFTLPRARLVSQEHLLLSSPEALRQSREHLLSPPRSPALPPDPTARASLAASHSNLLLGPGGPPTPLRGLPPPSSLHAHHHHALHGSPQPAWMSDAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV*