ENST00000593901.5 SYT3

Information
Transcript ID
ENST00000593901.5
Genome
hg19
Position
chr19:51,125,234-51,143,084
Strand
-
CDS length
1,773
Amino acid length
591
Gene symbol
SYT3
Gene type
protein-coding
Gene description
synaptotagmin 3
Gene Entrez Gene ID
84258
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 51,125,234 51,125,738
10 51,125,944 51,126,012
9 51,128,419 51,128,551
8 51,128,650 51,128,821
7 51,129,154 51,129,274
6 51,132,551 51,132,769
5 51,133,041 51,133,428
4 51,135,543 51,136,068
3 51,140,521 51,141,047
2 51,142,282 51,142,419
1 51,143,047 51,143,084
CDS
Exon number Type Start Stop
10 CDS 51,125,947 51,126,012
9 CDS 51,128,419 51,128,551
8 CDS 51,128,650 51,128,821
7 CDS 51,129,154 51,129,274
6 CDS 51,132,551 51,132,769
5 CDS 51,133,041 51,133,428
4 CDS 51,135,543 51,136,068
3 CDS 51,140,521 51,140,668
Other genome
Genome Chromosome Start End Links
hg38 chr19 50,621,977 50,639,827 Link
CDS sequence
ATGTCAGGAGACTACGAGGATGACCTCTGCCGGCGGGCACTCATCCTGGTCTCGGACCTCTGTGCGCGGGTCCGAGATGCTGACACCAACGACAGGTGCCAGGAGTTCAATGACCGAATCCGAGGCTATCCCCGGGGTCCAGATGCAGACATCTCCGTGAGCCTGCTGTCGGTCATCGTGACATTCTGTGGCATTGTCCTTCTGGGTGTCTCTCTCTTCGTGTCCTGGAAGTTGTGCTGGGTGCCCTGGCGGGACAAGGGAGGCTCGGCAGTGGGCGGTGGCCCCCTGCGCAAAGACCTAGGCCCTGGTGTCGGGCTGGCAGGCCTGGTAGGCGGAGGCGGGCACCACCTGGCGGCTGGCCTGGGTGGCCATCCTCTGCTGGGCGGCCCACACCACCATGCCCATGCCGCCCACCATCCACCCTTTGCTGAGCTGCTGGAGCCAGGCAGCCTGGGGGGTTCTGACACCCCTGAGCCCTCCTACTTGGACATGGACTCGTATCCAGAGGCTGCAGCAGCAGCAGTGGCCGCTGGGGTCAAACCGAGCCAAACATCCCCTGAGCTGCCCTCTGAGGGGGGAGCAGGCTCTGGGTTGCTCCTGCTGCCCCCCAGTGGTGGGGGCTTGCCCAGTGCCCAGTCACATCAGCAGGTCACAAGCCTGGCACCCACTACCAGGTACCCAGCCCTGCCCCGACCCCTCACCCAGCAGACTCTGACCTCCCAGCCGGACCCCAGCAGTGAGGAGCGGCCACCTGCCCTGCCCTTACCCCTGCCTGGAGGCGAGGAAAAAGCCAAACTCATTGGGCAGATTAAGCCAGAGCTGTACCAGGGGACTGGCCCTGGTGGCCGGCGGAGCGGTGGGGGCCCAGGCTCTGGAGAGGCAGGCACAGGGGCACCCTGTGGCCGTATCAGCTTCGCCCTGCGGTACCTCTATGGCTCGGACCAGCTGGTGGTGAGGATCCTGCAGGCCCTGGACCTCCCTGCCAAGGACTCCAACGGCTTCTCAGACCCCTACGTCAAGATCTACCTGCTGCCTGACCGCAAGAAAAAGTTTCAGACCAAGGTGCACAGGAAGACCCTGAACCCCGTCTTCAATGAGACGTTTCAATTCTCGGTGCCCCTGGCCGAGCTGGCCCAACGCAAACTGCACTTCAGCGTCTATGACTTTGACCGCTTCTCGCGGCACGACCTCATCGGCCAGGTGGTGCTGGACAACCTCCTGGAGCTGGCCGAGCAGCCCCCTGACCGCCCGCTCTGGAGGGACATCGTGGAGGGCGGCTCGGAAAAAGCAGATCTTGGGGAGCTCAACTTCTCACTCTGCTACCTCCCCACGGCCGGGCGCCTCACCGTGACCATCATCAAAGCCTCTAACCTCAAAGCGATGGACCTCACTGGCTTCTCAGACCCCTACGTGAAGGCCTCCCTGATCAGCGAGGGGCGGCGTCTGAAGAAGCGGAAAACCTCCATCAAGAAGAACACGCTGAACCCCACCTATAATGAGGCGCTGGTGTTCGACGTGGCCCCCGAGAGCGTGGAGAACGTGGGGCTCAGCATCGCCGTGGTAGACTACGACTGCATCGGGCACAACGAGGTGATCGGCGTGTGCCGTGTGGGCCCCGACGCTGCCGACCCGCACGGCCGCGAGCACTGGGCAGAGATGCTGGCCAATCCCCGCAAGCCCGTGGAGCACTGGCATCAGCTAGTGGAGGAAAAGACTGTGACCAGCTTCACAAAAGGCAGCAAAGGACTATCAGAGAAAGAGAACTCCGAGTGA
Amino sequence
MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNDRIRGYPRGPDADISVSLLSVIVTFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLGPGVGLAGLVGGGGHHLAAGLGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSYLDMDSYPEAAAAAVAAGVKPSQTSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRSGGGPGSGEAGTGAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDIVEGGSEKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPDAADPHGREHWAEMLANPRKPVEHWHQLVEEKTVTSFTKGSKGLSEKENSE*