ENST00000600100.6 GARIN5A

Information
Transcript ID
ENST00000600100.6
Genome
hg19
Position
chr19:50,970,045-50,980,105
Strand
-
CDS length
744
Amino acid length
248
Gene symbol
GARIN5A
Gene type
protein-coding
Gene description
golgi associated RAB2 interactor 5A
Gene Entrez Gene ID
112703
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 50,970,045 50,970,212
4 50,970,879 50,971,086
3 50,978,582 50,978,760
2 50,979,090 50,979,190
1 50,979,387 50,980,105
CDS
Exon number Type Start Stop
4 CDS 50,970,882 50,971,086
3 CDS 50,978,582 50,978,760
2 CDS 50,979,090 50,979,190
1 CDS 50,979,387 50,979,645
Other genome
Genome Chromosome Start End Links
hg38 chr19 50,466,788 50,476,848 Link
CDS sequence
ATGGGGCCGCCCCTTTGGCCTGATCTCCAGGAGCCGCCCCCTCCAGGGACGTCATCACAAATCAGGAGCCCGCTCTTGTGTGACGTCATAAAGCCCGCTCCGCATCATGACGTCACAGTGCGCGTAGTCCCGCCCCCTCGCTTTCTCCCTCTGCTCCTCCGTCCGCTCCCGTCGGACGGGGACATTGCAATGAGGCGGGATCGCGGCCCTAAGCCGGCCCTGGGTGGAGCTGGCGAGGTGGAACCAGGTGGGATGGCAGCCTCTCCCACGGGCCGTCCCAGACGGCTCCAACGCTACCTCCAGAGCGGCGAATTCGACCAGTTTCGGGACTTCCCCATCTTTGAGAGCAACTTCGTACAGTTCTGCCCCGACATCTATCCTGCCCCGACCTCTGACCTCTGGCCCCAGGTGACTCGGTTGGGAGAAGTTGCCAACGAGGTCACCATGGGGGTGGCAGCCTCCAGTCCAGCCCTGGAGCTCCCGGACCTATTGCTTCTGGCCGGCCCTGCCAAGGAGAACGGACACCTGCAACTCTTCGGGCTGTTCCCCTTGAAGTTCGTCCAGCTCTTTGTCCACGACAAAAGCCGGTGTCAGCTCGAGGTCAAGTTGAACACCAGCCGCACCTTCTACTTGCAGCTGCGGGCCCCACTCAAGACCCGAGACCGAGAGTTCGGCCAGTGGGTGCGGCTGCTCTACCGCCTGCGCTTCCTCTCTGCTTCTGCTGTGCCCTTCACGCAGGAGTAA
Amino sequence
MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSGEFDQFRDFPIFESNFVQFCPDIYPAPTSDLWPQVTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENGHLQLFGLFPLKFVQLFVHDKSRCQLEVKLNTSRTFYLQLRAPLKTRDREFGQWVRLLYRLRFLSASAVPFTQE*