ENST00000330205.10 SPATC1L
Information
- Transcript ID
- ENST00000330205.10
- Genome
- hg38
- Position
- chr21:46,161,148-46,184,476
- Strand
- -
- CDS length
- 561
- Amino acid length
- 187
- Gene symbol
- SPATC1L
- Gene type
- protein-coding
- Gene description
- spermatogenesis and centriole associated 1 like
- Gene Entrez Gene ID
- 84221
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 46,161,148 | 46,161,705 |
| 3 | 46,161,916 | 46,162,067 |
| 2 | 46,168,308 | 46,168,658 |
| 1 | 46,184,356 | 46,184,476 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 46,161,379 | 46,161,705 |
| 3 | CDS | 46,161,916 | 46,162,067 |
| 2 | CDS | 46,168,308 | 46,168,389 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr21 | 47,581,062 | 47,604,390 | Link |
CDS sequence
ATGGTCCGGCCTAAGAAGGTGTGTTTCTCGGAGAGCAGCCTGCCCACCGGGGACAGGACCAGGAGGAGCTACTACCTCAATGAGATCCAGAGCTTCGCGGGCGCCGAGAAGGACGCGCGCGTGGTGGGCGAGATCGCCTTCCAGCTGGACCGCCGCATCCTGGCCTACGTGTTCCCGGGCGTGACGCGGCTCTACGGCTTCACGGTGGCCAACATCCCCGAGAAGATCGAGCAGACCTCCACCAAGTCTCTGGACGGCTCCGTGGACGAGAGGAAGCTGCGCGAGCTGACGCAGCGCTACCTGGCCCTGAGCGCGCGCCTGGAGAAGCTGGGCTACAGCCGCGACGTGCACCCGGCGTTCAGCGAGTTCCTCATCAACACCTACGGAATCCTGAAGCAGCGGCCCGACCTGCGCGCCAACCCCCTGCACAGCAGCCCGGCCGCGCTGCGCAAGCTGGTCATCGACGTGGTGCCCCCCAAGTTCCTGGGCGACTCGCTGCTGCTGCTCAACTGCCTGTGCGAGCTCTCCAAGGAGGACGGCAAGCCCCTCTTCGCCTGGTGA
Amino sequence
MVRPKKVCFSESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW*