ENST00000335875.9 SLC6A16

Information
Transcript ID
ENST00000335875.9
Genome
hg19
Position
chr19:49,792,895-49,828,448
Strand
-
CDS length
2,211
Amino acid length
737
Gene symbol
SLC6A16
Gene type
protein-coding
Gene description
solute carrier family 6 member 16
Gene Entrez Gene ID
28968
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 49,792,895 49,793,649
11 49,793,862 49,794,024
10 49,796,480 49,796,639
9 49,797,084 49,797,285
8 49,797,624 49,797,810
7 49,812,133 49,812,374
6 49,812,558 49,812,668
5 49,812,908 49,813,083
4 49,813,297 49,813,423
3 49,813,610 49,813,767
2 49,814,190 49,814,668
1 49,828,305 49,828,448
CDS
Exon number Type Start Stop
12 CDS 49,793,380 49,793,649
11 CDS 49,793,862 49,794,024
10 CDS 49,796,480 49,796,639
9 CDS 49,797,084 49,797,285
8 CDS 49,797,624 49,797,810
7 CDS 49,812,133 49,812,374
6 CDS 49,812,558 49,812,668
5 CDS 49,812,908 49,813,083
4 CDS 49,813,297 49,813,423
3 CDS 49,813,610 49,813,767
2 CDS 49,814,190 49,814,604
Other genome
Genome Chromosome Start End Links
hg38 chr19 49,289,638 49,325,191 Link
CDS sequence
ATGAAGACAGAGGCCCAGCCTTCGACATCCTTGCTGGCAAACACCTCATGGACTGGCACAGTGATTTCTGACAGTGTCCCAGGAAGTCAAACGTGGGAAGACAAGGGTTCATTGACCCGGTCTGCAACATCTTGGACCTCAGAGGCCCAAGTTTCAGCAGCCCGGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAGGCGTTAACTGCCTCAGCCCTGAACCAGAAACCCACGCATGAGAAGGTGCAGATGACAGAGAAGAAAGAGAGTGAGGTCCTCCTTGCCCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTCTGGCTCAGGTGGGCTTCTCTATGAAGCCATCTTGTCTCTGGCGCTTTGCCTACCTGTGGCTTAACAGTGGAGGCTGCAGTTTCGCTGCCATCTACATCTTCATGCTGTTCCTGGTCGGGGTTCCTCTTCTCTTCCTGGAGATGGCAGCTGGTCAGAGCATGCGTCAGGGTGGCATGGGTGTATGGAAGATCATTGCCCCCTGGATTGGTGGTGTGGGGTATTCTAGCTTCATGGTGTGCTTCATCCTCGGCCTGTACTTCAATGTGGTCAATTCCTGGATCATCTTCTACATGAGCCAGTCCTTCCAGTTTCCCGTTCCATGGGAGAAATGTCCCTTAACGATGAACTCTAGTGGCTTTGATCCTGAATGTGAACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGATGGCGGGTCACCAGTCTACAGTCTGGTCCTGCCCTTCTTTCTTTGCTGGTGTCTTGTTGGTGCTTTCATGATCAATGGGCTCAAGTCCACTGGGAAGGTAATCTATGTCTTGGTACTGCTCCCCTGTTTCATCATTGTCGGTTTCTTCATCCGGACTCTACTCCTGGAAGGGGCAAAATTTGGCCTTCAACAGTTGGTGGTTGCCAAGATATCGGATGTGTACAATATGAGTGTGTGGTCTCTAGCAGGGGGTCAAGTTTTGTCTAACACAGGCATAGGCCTTGGCTCCGTTGCCTCCTTAGCCTCCTACATGCCCCAGTCCAACAACTGTCTCAGTGATGCCTTTCTCGTGTCTGTGATAAACCTGCTCACTTTGTTGGTTTTCACATCTTTCAACTTCTGTGTCCTGGGCTTCTGGGCGACAGTCATCACACATCGCTGCTGTGAGAGGAATGCTGAAATACTTTTAAAGCTGATAAACCTAGGGAAACTGCCTCCTGATGCCAAGCCCCCTGTCAACCTGCTTTACAACCCAACCTCCATCTACAATGCCTGGCTCAGTGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCCGCGAGGTGACTGAGTGCAACATAGAGACTCAGTTTCTTAAGGCTAGCGAGGGCCCAAAGTTTGCATTCCTGTCCTTTGTTGAAGCCATGTCCTTCCTTCCTCCGTCTGTCTTCTGGTCTTTTATCTTCTTCCTGATGTTGCTGGCCATGGGGCTGAGCAGCGCAATAGGGATTATGCAGGGCATCATTACTCCACTCCAGGACACCTTCTCTTTCTTCAGGAAACATACAAAGCTGCTCATAGTGGGAGTCTTTTTGCTCATGTTCGTGTGCGGCCTCTTCTTCACTCGACCTTCAGGCAGCTACTTCATCAGACTGCTGAGTGACTACTGGATAGTCTTCCCCATCATCGTCGTTGTCGTATTTGAAACCATGGCTGTATCCTGGGCCTATGGGGCCAGGAGGTTCCTTGCAGACCTGACGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTGTGCTGCTAATCATCTTTGTGACCATGATGGTTCATCTTTGTATGAAGCCGATCACCTACATGTCCTGGGACTCAAGCACCTCAAAAGAGGTGCTTCGACCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATCCTCCCCATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTCTACAAGTTGATGAAACAAAGTACCCATCAACTTGTAATGTGACTTCCTAA
Amino sequence
MKTEAQPSTSLLANTSWTGTVISDSVPGSQTWEDKGSLTRSATSWTSEAQVSAARVAEAQARTSQPKQISVLEALTASALNQKPTHEKVQMTEKKESEVLLARPFWSSKTEYILAQVGFSMKPSCLWRFAYLWLNSGGCSFAAIYIFMLFLVGVPLLFLEMAAGQSMRQGGMGVWKIIAPWIGGVGYSSFMVCFILGLYFNVVNSWIIFYMSQSFQFPVPWEKCPLTMNSSGFDPECERTTPSIYFWYQQALKASDRIEDGGSPVYSLVLPFFLCWCLVGAFMINGLKSTGKVIYVLVLLPCFIIVGFFIRTLLLEGAKFGLQQLVVAKISDVYNMSVWSLAGGQVLSNTGIGLGSVASLASYMPQSNNCLSDAFLVSVINLLTLLVFTSFNFCVLGFWATVITHRCCERNAEILLKLINLGKLPPDAKPPVNLLYNPTSIYNAWLSGLPQHIKSMVLREVTECNIETQFLKASEGPKFAFLSFVEAMSFLPPSVFWSFIFFLMLLAMGLSSAIGIMQGIITPLQDTFSFFRKHTKLLIVGVFLLMFVCGLFFTRPSGSYFIRLLSDYWIVFPIIVVVVFETMAVSWAYGARRFLADLTILLGHPISPIFGWLWPHLCPVVLLIIFVTMMVHLCMKPITYMSWDSSTSKEVLRPYPPWALLLMITLFAIVILPIPAYFVYCRIHRIPFRPKSGDGPMTASTSLPLSHQLTPSKEVQKEEILQVDETKYPSTCNVTS*