ENST00000339841.7 ELSPBP1
Information
- Transcript ID
- ENST00000339841.7
- Genome
- hg19
- Position
- chr19:48,497,889-48,528,411
- Strand
- +
- CDS length
- 672
- Amino acid length
- 224
- Gene symbol
- ELSPBP1
- Gene type
- protein-coding
- Gene description
- epididymal sperm binding protein 1
- Gene Entrez Gene ID
- 64100
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 48,497,889 | 48,498,068 |
2 | 48,511,908 | 48,511,994 |
3 | 48,517,428 | 48,517,565 |
4 | 48,519,150 | 48,519,296 |
5 | 48,522,976 | 48,523,134 |
6 | 48,525,427 | 48,525,591 |
7 | 48,528,209 | 48,528,411 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
2 | CDS | 48,511,925 | 48,511,994 |
3 | CDS | 48,517,428 | 48,517,565 |
4 | CDS | 48,519,150 | 48,519,296 |
5 | CDS | 48,522,976 | 48,523,134 |
6 | CDS | 48,525,427 | 48,525,584 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr19 | 47,994,632 | 48,025,154 | Link |
CDS sequence
ATGACCCGATGGTCCAGTTACCTGTTGGGATGGACAACCTTCCTTCTCTATTCCTATGAGTCAAGTGGAGGGATGCATGAGGAATGTGTCTTTCCTTTCACCTACAAGGGATCTGTTTACTTCACTTGCACCCATATTCATAGCTTATCCCCTTGGTGTGCCACCAGAGCCGTGTACAACGGCCAGTGGAAGTACTGCCAGAGTGAAGATTACCCACGCTGTATCTTCCCTTTCATCTATCGAGGAAAGGCTTATAACAGCTGCATCTCCCAGGGCAGCTTCTTAGGCAGTCTGTGGTGCTCAGTCACCTCTGTCTTCGATGAGAAACAGCAGTGGAAATTCTGTGAAACGAATGAGTATGGGGGAAATTCTCTCAGGAAGCCCTGCATCTTCCCCTCCATCTACAGAAATAATGTGGTCTCTGATTGCATGGAGGATGAAAGCAACAAGCTCTGGTGCCCAACCACAGAGAACATGGATAAGGATGGAAAGTGGAGTTTCTGTGCCGACACCAGAATTTCCGCGTTGGTCCCTGGCTTTCCTTGTCACTTTCCGTTCAACTATAAAAACAAGAATTATTTTAACTGCACTAACGAAGGATCAAAGGAGAACCTTGTGTGGTGTGCAACTTCTTACAACTACGACCAAGACCACACCTGGGTGTATTGCTGA
Amino sequence
MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRAVYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCETNEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALVPGFPCHFPFNYKNKNYFNCTNEGSKENLVWCATSYNYDQDHTWVYC*