ENST00000560168.1 SIX5

Information
Transcript ID
ENST00000560168.1
Genome
hg19
Position
chr19:46,268,651-46,272,113
Strand
-
CDS length
210
Amino acid length
70
Gene symbol
SIX5
Gene type
protein-coding
Gene description
SIX homeobox 5
Gene Entrez Gene ID
147912
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 46,268,651 46,270,413
2 46,271,300 46,271,370
1 46,271,973 46,272,113
CDS
Exon number Type Start Stop
3 CDS 46,270,405 46,270,413
2 CDS 46,271,300 46,271,370
1 CDS 46,271,973 46,272,102
Other genome
Genome Chromosome Start End Links
hg38 chr19 45,765,393 45,768,855 Link
CDS sequence
ATGGCTACCTTGCCTGCGGAGCCGAGCGCGGGGCCGGCGGCTGGGGGGGAGGCGGTGGCGGCGGCGGCGGCGACCGAAGAGGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTCAGCAACTGGTTCAAGAACCGGCGACAGCGCGACCGGACCGGGGCCGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGA
Amino sequence
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGQQLVQEPATARPDRGRRRRALQERV*