ENST00000344680.8 RTN2

Information
Transcript ID
ENST00000344680.8
Genome
hg19
Position
chr19:45,988,552-46,000,313
Strand
-
CDS length
1,419
Amino acid length
473
Gene symbol
RTN2
Gene type
protein-coding
Gene description
reticulon 2
Gene Entrez Gene ID
6253
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 45,988,552 45,989,047
9 45,989,313 45,989,371
8 45,991,729 45,991,775
7 45,991,895 45,991,964
6 45,992,106 45,992,244
5 45,992,604 45,992,811
4 45,997,424 45,997,678
3 45,997,784 45,998,263
2 45,998,353 45,998,397
1 46,000,050 46,000,313
CDS
Exon number Type Start Stop
10 CDS 45,988,966 45,989,047
9 CDS 45,989,313 45,989,371
8 CDS 45,991,729 45,991,775
7 CDS 45,991,895 45,991,964
6 CDS 45,992,106 45,992,244
5 CDS 45,992,604 45,992,811
4 CDS 45,997,424 45,997,678
3 CDS 45,997,784 45,998,263
2 CDS 45,998,353 45,998,397
1 CDS 46,000,050 46,000,083
Other genome
Genome Chromosome Start End Links
hg38 chr19 45,485,294 45,497,055 Link
CDS sequence
ATGGGGCAGGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTACAGCCTCCTCAACTCCTGATTCCACAGAAGGAGGGAACGACGACTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATTCTCAGAGGAGGACGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCCCCGGGAGCTGACCTTCTCCTACATCGCCTTTGATGGTGTAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCCCGCCCCCAGGGCCGCTCAGTCTCGGAACCACGAGACCAGCACCCTCAGCCCAGCCTGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGGACGACGGGGTGATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTGGAAGACCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGCCCGGGGAACGGGATCCGGGGAGGACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACGAAGAACCCCAAGAACCCAACAGATTGGAGACAGGAGAAGCTGGGGAAGAACTGGACCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGATTCGAACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGTGGCGGACCTGCTGTACTGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACAGGCCTGATGGTCTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCTGCTCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGGGGGATGGAGCCAACCCTTTCCAGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTTCTACATCTTGACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCTCATTCTGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
Amino sequence
MGQVLPVFAHCKEAPSTASSTPDSTEGGNDDSDFRELHTAREFSEEDEEETTSQDWGTPRELTFSYIAFDGVVGSGGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPDTAPPSERPLEDLRLRLDHLGWVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEELDLRLRLAQPSSPEVLTPQLSPGSGTPQAGTPSPSRSRDSNSGPEEPLLEEEEKQWGPLEREPVRGQCLDSTDQLEFTVEPRLLVADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIPGTGALASAAAAVSGSKAKAE*