ENST00000586638.5 APOC1

Information
Transcript ID
ENST00000586638.5
Genome
hg19
Position
chr19:45,418,126-45,422,603
Strand
+
CDS length
279
Amino acid length
93
Gene symbol
APOC1
Gene type
protein-coding
Gene description
apolipoprotein C1
Gene Entrez Gene ID
341
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,418,126 45,418,206
2 45,419,447 45,419,616
3 45,422,430 45,422,603
CDS
Exon number Type Start Stop
1 CDS 45,418,149 45,418,206
2 CDS 45,419,447 45,419,616
3 CDS 45,422,430 45,422,480
Other genome
Genome Chromosome Start End Links
hg38 chr19 44,914,869 44,919,346 Link
CDS sequence
ATGAGGCTCTTCCTGTCGCTCCCGGTCCTGGTGGTGGTTCTGTCGATCGTCTTGGAAGGCCCAGCCCCAGCCCAGGGGACCCCAGACGTCTCCAGTGCCTTGGATAAGCTGAAGGAGTTTGGAAACACACTGGAGGACAAGGCTCGGGAACTCATCAGCCGCATCAAACAGAGTGAACTTTCTGCCAAGATGCGGTTAGAACCCTTCCCAGGGCACGGGAGAGCTGGGGGAGTGGTTTTCAGAGACATTTCAGAAAGTGAAGGAGAAACTCAAGATTGA
Amino sequence
MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMRLEPFPGHGRAGGVVFRDISESEGETQD*