ENST00000588802.5 APOC1

Information
Transcript ID
ENST00000588802.5
Genome
hg19
Position
chr19:45,417,582-45,422,603
Strand
+
CDS length
252
Amino acid length
84
Gene symbol
APOC1
Gene type
protein-coding
Gene description
apolipoprotein C1
Gene Entrez Gene ID
341
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,417,582 45,417,746
2 45,418,129 45,418,206
3 45,419,447 45,419,582
4 45,422,430 45,422,603
CDS
Exon number Type Start Stop
2 CDS 45,418,149 45,418,206
3 CDS 45,419,447 45,419,582
4 CDS 45,422,430 45,422,487
Other genome
Genome Chromosome Start End Links
hg38 chr19 44,914,325 44,919,346 Link
CDS sequence
ATGAGGCTCTTCCTGTCGCTCCCGGTCCTGGTGGTGGTTCTGTCGATCGTCTTGGAAGGCCCAGCCCCAGCCCAGGGGACCCCAGACGTCTCCAGTGCCTTGGATAAGCTGAAGGAGTTTGGAAACACACTGGAGGACAAGGCTCGGGAACTCATCAGCCGCATCAAACAGAGTGAACTTTCTGCCAAGATGCGGGAGTGGTTTTCAGAGACATTTCAGAAAGTGAAGGAGAAACTCAAGATTGACTCATGA
Amino sequence
MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS*