ENST00000571838.2 CCER2
Information
- Transcript ID
- ENST00000571838.2
- Genome
- hg19
- Position
- chr19:39,399,620-39,402,826
- Strand
- -
- CDS length
- 801
- Amino acid length
- 267
- Gene symbol
- CCER2
- Gene type
- protein-coding
- Gene description
- coiled-coil glutamate rich protein 2
- Gene Entrez Gene ID
- 643669
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 39,399,620 | 39,399,965 |
| 4 | 39,401,203 | 39,401,723 |
| 3 | 39,402,206 | 39,402,293 |
| 2 | 39,402,452 | 39,402,492 |
| 1 | 39,402,738 | 39,402,826 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 39,399,876 | 39,399,965 |
| 4 | CDS | 39,401,203 | 39,401,723 |
| 3 | CDS | 39,402,206 | 39,402,293 |
| 2 | CDS | 39,402,452 | 39,402,492 |
| 1 | CDS | 39,402,738 | 39,402,798 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 38,908,980 | 38,912,186 | Link |
CDS sequence
ATGCCGCCCCGAGGGCCAGCCTCTGAGCTGCTGCTGCTGCGGCTGCTCCTGCTGGGGGCGGCCACCGCTGCTCCCTTGGCACCGAGACCCTCCAAGGAGGAGCTGACCCGCTGTCTGGCAGAGGTGGTCACAGAGGTGCTGACCGTGGGCCAGGTCCAGAGAGGACCCTGCACTGCTCTTCTCCACAAGGAGTTGTGCGGGACAGAGCCCCACGGCTGTGCGTCCACCGAGGAGAAAGGCCTGCTGCTTGGGGATTTCAAGAAGCAGGAGGCTGGGAAGATGAGGTCCAGCCAGGAGGTGAGGGATGAGGAAGAGGAGGAGGTAGCAGAGAGGACCCACAAGTCTGAGGTCCAGGAACAAGCCATCCGCATGCAAGGGCATCGCCAGCTCCACCAGGAGGAGGACGAGGAGGAGGAGAAGGAGGAGAGGAAGAGGGGGCCCATGGAGACCTTTGAGGACCTGTGGCAGCGGCATCTAGAGAATGGAGGGGACCTCCAGAAGCGGGTGGCAGAGAAGGCCAGTGACAAAGAGACGGCCCAGTTCCAGGCAGAGGAGAAGGGGGTGCGGGTGCTGGGCGGGGACCGCAGCCTGTGGCAGGGGGCCGAGAGAGGCGGAGGAGAGAGGCGCGAGGACTTGCCCCACCACCACCACCACCACCACCAGCCAGAGGCTGAGCCCAGGCAGGAGAAGGAGGAGGCTTCGGAGAGGGAGGAAAAGGAGGTGGAGCAGCTGGAGCACTTGAGAGACGAACTGAAGAAGGTGACAGAGACGCTGGGGGAGCAGCTCAGGAGGGAGGGCTGA
Amino sequence
MPPRGPASELLLLRLLLLGAATAAPLAPRPSKEELTRCLAEVVTEVLTVGQVQRGPCTALLHKELCGTEPHGCASTEEKGLLLGDFKKQEAGKMRSSQEVRDEEEEEVAERTHKSEVQEQAIRMQGHRQLHQEEDEEEEKEERKRGPMETFEDLWQRHLENGGDLQKRVAEKASDKETAQFQAEEKGVRVLGGDRSLWQGAERGGGERREDLPHHHHHHHQPEAEPRQEKEEASEREEKEVEQLEHLRDELKKVTETLGEQLRREG*