ENST00000343599.5 ZNF540

Information
Transcript ID
ENST00000343599.5
Genome
hg19
Position
chr19:38,086,154-38,104,996
Strand
+
CDS length
1,983
Amino acid length
661
Gene symbol
ZNF540
Gene type
protein-coding
Gene description
zinc finger protein 540
Gene Entrez Gene ID
163255
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 38,086,154 38,086,339
2 38,089,277 38,089,357
3 38,090,527 38,090,653
4 38,091,911 38,092,006
5 38,102,414 38,104,996
CDS
Exon number Type Start Stop
2 CDS 38,089,349 38,089,357
3 CDS 38,090,527 38,090,653
4 CDS 38,091,911 38,092,006
5 CDS 38,102,414 38,104,164
Other genome
Genome Chromosome Start End Links
hg38 chr19 37,595,253 37,614,095 Link
CDS sequence
ATGGCCCATGCATTGGTGACGTTCAGGGATGTGGCTATAGACTTCTCTCAGAAGGAATGGGAGTGCCTGGACACTACCCAGAGGAAATTGTACAGAGATGTGATGTTGGAGAATTATAATAACTTGGTCTCACTGGGATATTCTGGCTCAAAGCCAGATGTGATTACCTTACTGGAGCAAGGGAAAGAGCCCTGCGTGGTGGCGAGGGATGTGACAGGAAGACAGTGCCCCGGTTTGTTATCCAGGCATAAGACCAAGAAATTATCTTCAGAAAAGGACATTCATGAAATCAGTTTATCCAAAGAGAGTATAATAGAAAAAAGTAAAACTCTTCGTCTGAAAGGATCCATTTTTAGAAATGAGTGGCAGAACAAAAGTGAGTTTGAGGGTCAACAGGGACTTAAAGAAAGATCTATCAGTCAAAAGAAAATCGTCTCTAAAAAAATGTCAACTGATAGAAAACGTCCCTCTTTTACTCTGAATCAGAGAATTCACAATAGTGAGAAAAGCTGTGACTCACACTTGGTTCAACATGGGAAAATAGATTCTGATGTGAAACATGATTGTAAAGAATGTGGGAGTACTTTTAATAATGTCTATCAGCTTACTCTCCATCAGAAAATTCATACTGGTGAAAAATCCTGTAAATGTGAGAAATGTGGGAAAGTTTTTAGTCATAGCTATCAACTTACTCTGCATCAGAGATTTCATACTGGTGAGAAACCCTATGAATGTCAAGAATGTGGGAAGACCTTTACTCTTTACCCACAACTTAATCGACATCAGAAAATTCACACTGGTAAAAAACCCTATATGTGTAAGAAATGTGATAAGGGTTTTTTTAGTAGATTAGAACTTACTCAACATAAAAGAATTCATACTGGTAAGAAATCTTATGAATGTAAAGAATGTGGAAAAGTTTTTCAACTTATTTTCTACTTTAAAGAACATGAGAGAATTCATACAGGTAAGAAACCCTATGAATGTAAGGAGTGTGGGAAAGCTTTTAGTGTATGCGGACAACTTACCCGTCATCAGAAAATTCATACTGGTGTAAAACCCTACGAATGTAAGGAATGTGGAAAGACCTTTAGACTTAGTTTTTACCTTACTGAACACAGAAGAACTCATGCAGGTAAGAAACCTTATGAATGTAAGGAGTGTGGGAAATCATTTAATGTGCGTGGACAGCTTAATCGGCATAAAACAATCCATACTGGTATAAAACCTTTTGCATGTAAGGTGTGTGAGAAGGCTTTTAGTTATAGTGGTGACCTCAGAGTACATTCTAGAATTCATACTGGAGAGAAACCATATGAATGTAAGGAATGCGGGAAAGCCTTTATGCTTCGTTCAGTCCTTACTGAACATCAGAGACTTCATACTGGTGTGAAGCCCTACGAATGTAAGGAATGTGGGAAGACCTTTCGAGTTCGTTCTCAAATTAGTCTACATAAGAAAATTCATACTGATGTGAAGCCCTACAAATGTGTACGATGTGGGAAGACCTTTAGATTTGGTTTCTACCTTACTGAACACCAGAGAATTCACACTGGTGAAAAGCCCTATAAATGTAAAGAATGTGGAAAGGCCTTTATTCGTAGAGGGAATCTTAAAGAACATCTGAAAATTCATTCTGGTTTAAAACCCTATGACTGTAAAGAATGTGGGAAGTCCTTTAGTCGGCGTGGGCAGTTCACTGAACATCAGAAAATTCATACGGGTGTAAAACCATACAAATGTAAAGAATGTGGGAAGGCCTTTAGTCGTAGTGTAGACCTTAGAATACATCAAAGAATTCATACTGGTGAGAAACCCTATGAGTGTAAACAATGTGGGAAGGCCTTTAGACTTAATTCACACCTTACTGAACATCAGAGAATTCACACTGGTGAGAAACCCTATGAGTGTAAGGTATGTAGAAAGGCCTTTAGACAATATTCACATCTTTATCAACATCAGAAAACTCATAATGTAATTTAA
Amino sequence
MAHALVTFRDVAIDFSQKEWECLDTTQRKLYRDVMLENYNNLVSLGYSGSKPDVITLLEQGKEPCVVARDVTGRQCPGLLSRHKTKKLSSEKDIHEISLSKESIIEKSKTLRLKGSIFRNEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNSEKSCDSHLVQHGKIDSDVKHDCKECGSTFNNVYQLTLHQKIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKPYECQECGKTFTLYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKRIHTGKKSYECKECGKVFQLIFYFKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLHKKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSHLYQHQKTHNVI*