ENST00000588780.5 CAPNS1

Information
Transcript ID
ENST00000588780.5
Genome
hg19
Position
chr19:36,631,870-36,640,895
Strand
+
CDS length
837
Amino acid length
279
Gene symbol
CAPNS1
Gene type
protein-coding
Gene description
calpain small subunit 1
Gene Entrez Gene ID
826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,631,870 36,632,122
2 36,633,202 36,633,235
3 36,633,554 36,633,643
4 36,633,811 36,633,868
5 36,633,966 36,634,030
6 36,636,678 36,636,776
7 36,636,878 36,636,956
8 36,637,098 36,637,214
9 36,640,480 36,640,538
10 36,640,715 36,640,895
CDS
Exon number Type Start Stop
1 CDS 36,631,914 36,632,122
2 CDS 36,633,202 36,633,235
3 CDS 36,633,554 36,633,643
4 CDS 36,633,811 36,633,868
5 CDS 36,633,966 36,634,030
6 CDS 36,636,678 36,636,776
7 CDS 36,636,878 36,636,956
8 CDS 36,637,098 36,637,214
9 CDS 36,640,480 36,640,538
10 CDS 36,640,715 36,640,741
Other genome
Genome Chromosome Start End Links
hg38 chr19 36,140,968 36,149,993 Link
CDS sequence
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGGGGGCCTGGGAAATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGAGGCGGCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCCCCCACGCACACATTACTCCAACATTGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCTGGCTGGAGATGACATGGAGGTCAGCGCCACAGAACTCATGAACATTCTCAATAAGGTTGTGACACGACACCCTGATCTGAAGACTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGCCGTGATGGATCTGTCACTCTTCTTAACACCCTCCCACCAGAGCGACACCACAGGCAAGCTGGGCTTTGAGGAATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCATATACAAACAGTTCGACACTGACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTGA
Amino sequence
MFLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDLSLFLTPSHQSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS*