ENST00000552561.5 TMEM106C

Information
Transcript ID
ENST00000552561.5
Genome
hg38
Position
chr12:47,963,605-47,968,229
Strand
+
CDS length
753
Amino acid length
251
Gene symbol
TMEM106C
Gene type
protein-coding
Gene description
transmembrane protein 106C
Gene Entrez Gene ID
79022
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,963,605 47,963,633
2 47,964,209 47,964,423
3 47,965,282 47,965,345
4 47,965,838 47,965,997
5 47,966,089 47,966,229
6 47,966,683 47,966,732
7 47,967,208 47,967,261
8 47,968,133 47,968,229
CDS
Exon number Type Start Stop
2 CDS 47,964,237 47,964,423
3 CDS 47,965,282 47,965,345
4 CDS 47,965,838 47,965,997
5 CDS 47,966,089 47,966,229
6 CDS 47,966,683 47,966,732
7 CDS 47,967,208 47,967,261
8 CDS 47,968,133 47,968,229
Other genome
Genome Chromosome Start End Links
hg19 chr12 48,357,388 48,362,012 Link
CDS sequence
ATGGGGTCTCAGCATTCCGCTGCTGCTCGCCCCTCCTCCTGCAGGCGAAAGCAAGAAGATGACAGGGACGGTTTGCTGGCTGAACGAGAGCAGGAAGAAGCCATTGCTCAGTTCCCATATGTGGAATTCACCGGGAGAGATAGCATCACCTGTCTCACGTGCCAGGGGACAGGCTACATTCCAACAGAGCAAGTAAATGAGTTGGTGGCTTTGATCCCACACAGTGATCAGAGATTGCGCCCTCAGCGAACTAAGCAATATGTCCTCCTGTCCATCCTGCTTTGTCTCCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCCGCATTCAGTCCTTGTGGATGATGACGGCATCAAAGTGGTGAAAGTCACATTTAATAAGCAAGACTCCCTTGTAATTCTCACCATCATGGCCACCCTGAAAATCAGGAACTCCAACTTCTACACGGTGGCAGTGACCAGCCTGTCCAGCCAGATTCAGTACATGAACACAGTGGTCAGTACATATGTGACTACTAACGTCTCCCTTATTCCACCTCGGAGTGAGCAACTGGTGAATTTTACCGGGAAGGCCGAGATGGGAGGACCGTTTTCCTATGTGTACTTCTTCTGCACGGTACCTGAGATCCTGGTGCACAACATAGTGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCTCATGACCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGAGGAAATTCCACAGCTATTTAA
Amino sequence
MGSQHSAAARPSSCRRKQEDDRDGLLAEREQEEAIAQFPYVEFTGRDSITCLTCQGTGYIPTEQVNELVALIPHSDQRLRPQRTKQYVLLSILLCLLASGLVVFFLFPHSVLVDDDGIKVVKVTFNKQDSLVILTIMATLKIRNSNFYTVAVTSLSSQIQYMNTVVSTYVTTNVSLIPPRSEQLVNFTGKAEMGGPFSYVYFFCTVPEILVHNIVIFMRTSVKISYIGLMTQSSLETHHYVDCGGNSTAI*