ENST00000675741.1 SCN1B

Information
Transcript ID
ENST00000675741.1
Genome
hg19
Position
chr19:35,523,221-35,531,353
Strand
+
CDS length
684
Amino acid length
228
Gene symbol
SCN1B
Gene type
protein-coding
Gene description
sodium voltage-gated channel beta subunit 1
Gene Entrez Gene ID
6324
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,523,221 35,523,598
2 35,524,403 35,524,643
3 35,526,792 35,526,917
4 35,530,021 35,530,162
5 35,530,539 35,530,610
6 35,530,701 35,531,353
CDS
Exon number Type Start Stop
1 CDS 35,523,491 35,523,598
2 CDS 35,524,403 35,524,643
3 CDS 35,526,792 35,526,917
4 CDS 35,530,021 35,530,162
5 CDS 35,530,539 35,530,605
Other genome
Genome Chromosome Start End Links
hg38 chr19 35,032,317 35,040,449 Link
CDS sequence
ATGACCTTCAAAATTCTTTGCATCTCCTGCAAGCGCCGCAGCGAGACCAACGCTGAGACCTTCACCGAGTGGACCTTCCGCCAGAAGGGCACTGAGGAGTTTGTCAAGATCCTGCGCTATGAGAATGAGGTGTTGCAGCTGGAGGAGGATGAGCGCTTCGAGGGCCGCGTGGTGTGGAATGGCAGCCGGGGCACCAAAGACCTGCAGGATCTGTCTATCTTCATCACCAATGTCACCTACAACCACTCGGGCGACTACGAGTGCCACGTCTACCGCCTGCTCTTCTTCGAAAACTACGAGCACAACACCAGCGTCGTCAAGAAGATCCACATTGAGGTAGTGGACAAAGAGACCAAGTCTTGCTCTGTTGCCCAGGCTGGGATACTGTGGCGTGATCATAGCCCACTGCAGCCTCGAACTCCCGAAATCCAGCGATCCTTCTGCTTGAGCCTCCCACGTAGCTGGGACTACAGGTCCAACAGAGACATGGCATCCATCGTGTCTGAGATCATGATGTATGTGCTCATTGTGGTGTTGACCATATGGCTCGTGGCAGAGATGATTTACTGCTACAAGAAGATCGCTGCCGCCACGGAGACTGCTGCACAGGAGAATGCCTCGGAATACCTGGCCATCACCTCTGAAAGCAAAGAGAACTGCACGGGCGTCCAGGTGGCCGAATAG
Amino sequence
MTFKILCISCKRRSETNAETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYECHVYRLLFFENYEHNTSVVKKIHIEVVDKETKSCSVAQAGILWRDHSPLQPRTPEIQRSFCLSLPRSWDYRSNRDMASIVSEIMMYVLIVVLTIWLVAEMIYCYKKIAAATETAAQENASEYLAITSESKENCTGVQVAE*