ENST00000170564.7 GPATCH1

Information
Transcript ID
ENST00000170564.7
Genome
hg19
Position
chr19:33,572,087-33,621,448
Strand
+
CDS length
2,796
Amino acid length
932
Gene symbol
GPATCH1
Gene type
protein-coding
Gene description
G-patch domain containing 1
Gene Entrez Gene ID
55094
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 33,572,087 33,572,172
2 33,579,040 33,579,174
3 33,581,686 33,581,771
4 33,584,265 33,584,425
5 33,585,078 33,585,175
6 33,586,668 33,586,726
7 33,587,113 33,587,352
8 33,588,661 33,588,808
9 33,592,401 33,592,480
10 33,597,601 33,597,805
11 33,600,623 33,600,922
12 33,602,630 33,602,808
13 33,603,392 33,603,519
14 33,604,673 33,604,809
15 33,605,159 33,605,325
16 33,608,731 33,608,947
17 33,609,916 33,610,023
18 33,616,011 33,616,108
19 33,617,494 33,617,639
20 33,621,036 33,621,448
CDS
Exon number Type Start Stop
1 CDS 33,572,100 33,572,172
2 CDS 33,579,040 33,579,174
3 CDS 33,581,686 33,581,771
4 CDS 33,584,265 33,584,425
5 CDS 33,585,078 33,585,175
6 CDS 33,586,668 33,586,726
7 CDS 33,587,113 33,587,352
8 CDS 33,588,661 33,588,808
9 CDS 33,592,401 33,592,480
10 CDS 33,597,601 33,597,805
11 CDS 33,600,623 33,600,922
12 CDS 33,602,630 33,602,808
13 CDS 33,603,392 33,603,519
14 CDS 33,604,673 33,604,809
15 CDS 33,605,159 33,605,325
16 CDS 33,608,731 33,608,947
17 CDS 33,609,916 33,610,023
18 CDS 33,616,011 33,616,108
19 CDS 33,617,494 33,617,639
20 CDS 33,621,036 33,621,066
Other genome
Genome Chromosome Start End Links
hg38 chr19 33,081,181 33,130,542 Link
CDS sequence
ATGGCGGCGCGGGACAGTGACAGCGAAGAAGATCTGGTCAGCTATGGGACCGGGCTGGAGCCTCTGGAAGAAGGTGAAAGACCAAAGAAACCAATCCCTCTTCAGGATCAGACTGTCAGAGATGAAAAAGGAAGGTATAAACGATTCCACGGGGCCTTTAGTGGAGGTTTCTCTGCTGGATACTTCAATACTGTTGGCTCAAAAGAAGGATGGACACCCTCTACCTTTGTGTCTTCACGACAGAACAGAGCAGACAAATCTGTTCTTGGTCCTGAAGATTTTATGGATGAAGAGGATCTTAGTGAATTTGGGATAGCACCTAAAGCGATTGTCACCACAGACGATTTTGCCTCCAAAACCAAAGACAGAATACGAGAAAAGGCTAGGCAGTTGGCCGCTGCTACTGCCCCTATTCCTGGAGCCACCCTCCTTGATGACCTCATAACGCCAGCAAAATTATCTGTTGGTTTCGAATTGCTAAGAAAAATGGGTTGGAAAGAAGGACAAGGAGTTGGTCCTCGAGTAAAGAGACGGCCACGCCGACAGAAACCTGATCCTGGAGTCAAAATCTATGGCTGTGCATTACCCCCTGGAAGCTCGGAAGGATCTGAGGGTGAAGATGATGACTACTTGCCTGATAATGTGACCTTTGCACCCAAAGATGTCACACCTGTGGATTTCACACCTAAAGATAATGTGCATGGTCTAGCTTACAAGGGCCTGGATCCCCACCAGGCACTGTTTGGAACTTCGGGAGAACATTTTAATCTTTTCAGTGGTGGTTCTGAGAGAGCTGGCGATCTTGGAGAAATTGGACTGAATAAAGGAAGAAAATTGGGAATTTCAGGCCAGGCTTTTGGTGTAGGTGCCCTGGAAGAGGAAGATGATGATATCTATGCCACAGAAACTCTATCCAAGTATGACACTGTTCTGAAGGACGAGGAGCCTGGAGACGGACTCTATGGCTGGACAGCACCCAGGCAGTATAAAAACCAGAAAGAATCAGAGAAAGACCTTCGGTACGTTGGCAAAATTTTGGATGGATTTTCCTTGGCTTCTAAACCTTTATCTTCTAAGAAAATCTATCCACCTCCAGAGCTGCCAAGAGACTATCGACCAGTGCATTATTTCAGACCCATGGTGGCCGCCACCTCCGAGAACTCACACTTACTGCAGGTATTATCAGAGTCAGCTGGAAAGGCAACGCCTGACCCAGGGACACACAGTAAGCACCAACTGAATGCCTCCAAACGGGCTGAGTTGCTTGGAGAGACGCCTATTCAAGGTTCAGCTACTTCAGTGTTAGAATTTCTGTCCCAAAAAGACAAAGAGAGAATCAAAGAAATGAAGCAGGCAACTGACCTGAAAGCAGCTCAGCTCAAGGCCAGGAGTCTGGCCCAGAACGCTCAGAGCAGCAGAGCCCAGCTCTCCCCTGCAGCGGCTGCTGGGCACTGCTCTTGGAACATGGCATTAGGTGGTGGGACGGCCACCTTAAAAGCCAGCAACTTCAAGCCTTTCGCCAAAGATCCGGAAAAGCAAAAGCGATACGACGAGTTCTTAGTACACATGAAACAGGGTCAGAAAGATGCTCTGGAACGCTGTCTGGACCCCAGCATGACAGAGTGGGAGCGAGGCCGTGAGCGGGATGAGTTTGCCCGGGCGGCCCTGCTGTACGCATCTTCCCATTCGACCTTGTCCTCCAGGTTCACTCACGCCAAGGAGGAGGATGACTCAGATCAGGTTGAAGTCCCTCGAGACCAAGAGAATGATGTCGGGGATAAGCAGTCGGCTGTGAAGATGAAGATGTTTGGGAAGCTCACCCGAGACACGTTTGAGTGGCACCCTGACAAGCTTCTATGTAAGAGATTTAATGTCCCTGACCCTTATCCAGATTCAACTTTAGTTGGCTTACCAAGAGTGAAGCGTGACAAGTACTCAGTCTTCAACTTTCTGACGCTCCCAGAGACAGCTTCCTTGCCCACCACTCAAGCATCAAGTGAAAAAGTATCACAGCACCGAGGTCCCGACAAATCAAGAAAACCATCCAGATGGGATACCTCTAAACACGAAAAGAAAGAAGATTCCATTAGTGAATTTTTAAGTTTGGCTAGATCAAAAGCCGAGCCACCTAAACAACAGTCCAGCCCCTTAGTAAACAAAGAGGAAGAGCATGCACCAGAATTATCCGCAAATCAGACCGTCAACAAAGATGTGGACGCACAGGCTGAAGGAGAAGGGAGCCGCCCATCCATGGACTTATTCAGGGCCATCTTTGCCAGTTCCTCAGATGAAAAGTCCTCATCCTCCGAGGATGAGCAAGGTGACAGTGAAGATGATCAGGCAGGCTCTGGGGAGGCCAACTTCCAAAGCTCCCAAGACACTGACTTGGGGGAAACATCATCTGTGGCTCACGCTCTTGTGCCAGCACCCCAGGAGCCGCCACCTTCCTTCCCGATACAAAAGATGCAGATAGATGAAAGAGAAGAGTTCGGCCCGCGGCTGCCTCCCGTCTTCTGCCCCAATGCTCGTCAGACACTTGAGGTTCCTCAAAAAGAGAAACATAAAAAGAACAAAGACAAGCACAAGGCCAAGAAAGAGCACAGGCGGAAGAAAGAGAAGAAAAAGAAACACAGGAAGCACAAACACAAAGGCAAGCAAAAGAATAAAAAACCAGAGAAAAGTAGTAGCTCCGAGAGTTCCGACAGCAGCGACAGCCAGAGTGACGAGGAAACCGCAGACGTGTCGCCCCAGGAGCTGCTGAGACGGCTGAAAAGTCTTCCACTAAGAAGGCAGTAA
Amino sequence
MAARDSDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKTKDRIREKARQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGVGPRVKRRPRRQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKDVTPVDFTPKDNVHGLAYKGLDPHQALFGTSGEHFNLFSGGSERAGDLGEIGLNKGRKLGISGQAFGVGALEEEDDDIYATETLSKYDTVLKDEEPGDGLYGWTAPRQYKNQKESEKDLRYVGKILDGFSLASKPLSSKKIYPPPELPRDYRPVHYFRPMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAELLGETPIQGSATSVLEFLSQKDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAAAAGHCSWNMALGGGTATLKASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMTEWERGRERDEFARAALLYASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADVSPQELLRRLKSLPLRRQ*