ENST00000252816.10 LSM4

Information
Transcript ID
ENST00000252816.10
Genome
hg19
Position
chr19:18,417,717-18,433,881
Strand
-
CDS length
378
Amino acid length
126
Gene symbol
LSM4
Gene type
protein-coding
Gene description
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Entrez Gene ID
25804
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 18,417,717 18,418,365
3 18,420,488 18,420,671
2 18,423,414 18,423,512
1 18,433,828 18,433,881
CDS
Exon number Type Start Stop
4 CDS 18,418,274 18,418,365
3 CDS 18,420,488 18,420,671
2 CDS 18,423,414 18,423,512
1 CDS 18,433,828 18,433,830
Other genome
Genome Chromosome Start End Links
hg38 chr19 18,306,907 18,323,071 Link
CDS sequence
ATGTTGGTGGAGCTGAAAAATGGGGAGACGTACAATGGACACCTGGTGAGCTGCGACAACTGGATGAACATTAACCTGCGAGAAGTCATCTGCACGTCCAGGGACGGGGACAAGTTCTGGCGGATGCCCGAGTGCTACATCCGCGGCAGCACCATCAAGTACCTGCGCATCCCCGACGAGATCATCGACATGGTCAAGGAGGAGGTGGTGGCCAAGGGCCGCGGCCGCGGAGGCCTGCAGCAGCAGAAGCAGCAGAAAGGCCGCGGCATGGGCGGCGCTGGCCGAGGTGTGTTTGGTGGCCGGGGCCGAGGTGGGATCCCGGGCACAGGCAGAGGCCAGCCAGAGAAGAAGCCTGGCAGACAGGCGGGCAAACAGTGA
Amino sequence
MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ*