ENST00000596136.5 USE1

Information
Transcript ID
ENST00000596136.5
Genome
hg19
Position
chr19:17,326,199-17,330,638
Strand
+
CDS length
441
Amino acid length
147
Gene symbol
USE1
Gene type
protein-coding
Gene description
unconventional SNARE in the ER 1
Gene Entrez Gene ID
55850
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,326,199 17,326,316
2 17,326,611 17,326,660
3 17,326,801 17,326,879
4 17,326,978 17,327,130
5 17,328,262 17,328,271
6 17,329,173 17,329,200
7 17,330,440 17,330,638
CDS
Exon number Type Start Stop
1 CDS 17,326,215 17,326,316
2 CDS 17,326,611 17,326,660
3 CDS 17,326,801 17,326,879
4 CDS 17,326,978 17,327,130
5 CDS 17,328,262 17,328,271
6 CDS 17,329,173 17,329,200
7 CDS 17,330,440 17,330,458
Other genome
Genome Chromosome Start End Links
hg38 chr19 17,215,390 17,219,829 Link
CDS sequence
ATGGCGGCGTCGAGGCTGGAGCTAAACCTGGTGCGGCTGCTATCCCGCTGCGAGGCGATGGCAGCGGAGAAACGGGACCCGGACGAGTGGCGCCTGGAGAAGTACGTGGGAGCCCTAGAGGACATGTTGCAGGCCCTGAAGGTCCACGCGAGCAAACCGGCCTCTGAGGTGATCAATGAATATTCCTGGAAGGTGGATTTTCTGAAGGGGATGCTGCAAGCCGAGAAGCTGACCTCCTCCTCAGAGAAAGCACTGGCCAACCAGTTCCTGGCCCCTGGCCGTGTGCCAACCACAGCCAGAGAGCGAGTGCCCGCCACAAAGACGGTGCATCTGCAGTCACGGGCGCGGTACACCAGCGAGATGCGGAGTGAGCTACTAGGCACGGACTCTGCAGAGCCTGAGATGGACGTAAGGAAGAGAACACCCTGTCACACTCACTGA
Amino sequence
MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQALKVHASKPASEVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRARYTSEMRSELLGTDSAEPEMDVRKRTPCHTH*