ENST00000595101.5 USE1
Information
- Transcript ID
- ENST00000595101.5
- Genome
- hg19
- Position
- chr19:17,326,197-17,329,635
- Strand
- +
- CDS length
- 408
- Amino acid length
- 136
- Gene symbol
- USE1
- Gene type
- protein-coding
- Gene description
- unconventional SNARE in the ER 1
- Gene Entrez Gene ID
- 55850
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 17,326,197 | 17,326,316 |
2 | 17,326,611 | 17,326,660 |
3 | 17,326,801 | 17,326,879 |
4 | 17,326,978 | 17,327,130 |
5 | 17,328,262 | 17,329,635 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 17,326,215 | 17,326,316 |
2 | CDS | 17,326,611 | 17,326,660 |
3 | CDS | 17,326,801 | 17,326,879 |
4 | CDS | 17,326,978 | 17,327,130 |
5 | CDS | 17,328,262 | 17,328,285 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr19 | 17,215,388 | 17,218,826 | Link |
CDS sequence
ATGGCGGCGTCGAGGCTGGAGCTAAACCTGGTGCGGCTGCTATCCCGCTGCGAGGCGATGGCAGCGGAGAAACGGGACCCGGACGAGTGGCGCCTGGAGAAGTACGTGGGAGCCCTAGAGGACATGTTGCAGGCCCTGAAGGTCCACGCGAGCAAACCGGCCTCTGAGGTGATCAATGAATATTCCTGGAAGGTGGATTTTCTGAAGGGGATGCTGCAAGCCGAGAAGCTGACCTCCTCCTCAGAGAAAGCACTGGCCAACCAGTTCCTGGCCCCTGGCCGTGTGCCAACCACAGCCAGAGAGCGAGTGCCCGCCACAAAGACGGTGCATCTGCAGTCACGGGCGCGGTACACCAGCGAGATGCGGAGTGAGCTACTAGGCACGGACTCTGCAGGTGAGTCACCATGA
Amino sequence
MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQALKVHASKPASEVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRARYTSEMRSELLGTDSAGESP*