ENST00000454233.6 DDX39A
Information
- Transcript ID
- ENST00000454233.6
- Genome
- hg19
- Position
- chr19:14,520,722-14,530,195
- Strand
- -
- CDS length
- 804
- Amino acid length
- 268
- Gene symbol
- DDX39A
- Gene type
- protein-coding
- Gene description
- DExD-box helicase 39A
- Gene Entrez Gene ID
- 10212
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 14,520,722 | 14,520,793 |
6 | 14,521,028 | 14,521,146 |
5 | 14,521,801 | 14,521,984 |
4 | 14,522,318 | 14,522,410 |
3 | 14,523,363 | 14,523,490 |
2 | 14,523,825 | 14,524,036 |
1 | 14,530,082 | 14,530,195 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 14,520,722 | 14,520,793 |
6 | CDS | 14,521,028 | 14,521,146 |
5 | CDS | 14,521,801 | 14,521,984 |
4 | CDS | 14,522,318 | 14,522,410 |
3 | CDS | 14,523,363 | 14,523,490 |
2 | CDS | 14,523,825 | 14,524,032 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr19 | 14,409,910 | 14,419,383 | Link |
CDS sequence
ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTGA
Amino sequence
MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDVLWEVSHKGVAHWKVLGRRDAQR*