ENST00000588872.3 PODNL1

Information
Transcript ID
ENST00000588872.3
Genome
hg19
Position
chr19:14,042,000-14,049,230
Strand
-
CDS length
1,725
Amino acid length
575
Gene symbol
PODNL1
Gene type
protein-coding
Gene description
podocan like 1
Gene Entrez Gene ID
79883
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 14,042,000 14,042,700
9 14,042,777 14,042,925
8 14,043,611 14,044,268
7 14,044,691 14,044,806
6 14,045,067 14,045,223
5 14,046,534 14,046,643
4 14,046,793 14,046,857
3 14,047,180 14,047,273
2 14,048,598 14,048,819
1 14,048,992 14,049,230
CDS
Exon number Type Start Stop
10 CDS 14,042,550 14,042,700
9 CDS 14,042,777 14,042,925
8 CDS 14,043,611 14,044,268
7 CDS 14,044,691 14,044,806
6 CDS 14,045,067 14,045,223
5 CDS 14,046,534 14,046,643
4 CDS 14,046,793 14,046,857
3 CDS 14,047,180 14,047,273
2 CDS 14,048,598 14,048,819
1 CDS 14,048,992 14,048,994
Other genome
Genome Chromosome Start End Links
hg38 chr19 13,931,187 13,938,417 Link
CDS sequence
ATGTGGCCGAGCCTGCTGCTGCTCCTGCTGTTGCCGGGGCCCCCGCCCGTCGCCGGCTTGGAAGACGCTGCCTTCCCCCACCTGGGGGAGAGCTTGCAGCCCCTGCCCCGGGCCTGTCCCCTGCGCTGCTCCTGCCCCCGAGTCGACACTGTGGACTGTGATGGCTTGGACCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGCACCTCTCCCTGCAGAACAACCAGCTCCAGGAACTCCCCTACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGGCCTGCCTGACGAGGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTGCGTGGCTCACAACAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTCCCTCCGTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTCCCCCTCACCTTTGGGGAGAAGCCGGCACTCAGGTCCGTGTACCTCCACAACAACCAGCTGAGCAACGCTGGCCTGCCCCCCGACGCCTTCCGCGGCTCCGAGGCCATCGCCACCCTCAGCCTCTCCAACAACCAGCTCAGCTACCTGCCGCCCAGCCTGCCGCCCTCACTCGAGCGGCTCCACCTGCAGAACAATCTCATCTCCAAGGTGCCCCGAGGAGCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTACCTCCAGCACAACCAGCTGACAGACAGTGGCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGAATACCTGGATCTCTCCCACAACCAGCTGACCACAGTGCCCGCCGGCCTGCCCCGGACCCTGGCTATCCTGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCTGCGCTATTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGGGCTCTGCGGCCGCTGCGGGGCCTGCACACGCTGCACCTCTATGGCAATGGGCTGGACCGCGTGCCTCCAGCCCTGCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGGAGCTTAACCTGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCGCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGTGCCCCCGGACCTGCCTGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGGCCAACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCAGGGGGCCCCTGA
Amino sequence
MWPSLLLLLLLPGPPPVAGLEDAAFPHLGESLQPLPRACPLRCSCPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVAPQFLPRSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHVAALGARDLVATPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRVGDIGPGTWHELQALQMLDLSHNELSFVPPDLPEALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRLHMTSIAAEAFLGLPNLRVVDTAGNPEQVLIRLPPTTPRGPRAGGP*