ENST00000541595.6 ZNF559-ZNF177
Information
- Transcript ID
- ENST00000541595.6
- Genome
- hg19
- Position
- chr19:9,435,017-9,493,293
- Strand
- +
- CDS length
- 966
- Amino acid length
- 322
- Gene symbol
- ZNF559-ZNF177
- Gene type
- protein-coding
- Gene description
- ZNF559-ZNF177 readthrough
- Gene Entrez Gene ID
- 100529215
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 9,435,017 | 9,435,080 |
2 | 9,435,371 | 9,435,456 |
3 | 9,449,170 | 9,449,258 |
4 | 9,466,333 | 9,466,397 |
5 | 9,468,504 | 9,468,580 |
6 | 9,475,538 | 9,475,624 |
7 | 9,486,992 | 9,487,099 |
8 | 9,488,935 | 9,489,020 |
9 | 9,489,638 | 9,489,764 |
10 | 9,490,203 | 9,490,295 |
11 | 9,490,733 | 9,490,815 |
12 | 9,491,824 | 9,493,293 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
8 | CDS | 9,488,988 | 9,489,020 |
9 | CDS | 9,489,638 | 9,489,764 |
10 | CDS | 9,490,203 | 9,490,295 |
11 | CDS | 9,490,733 | 9,490,815 |
12 | CDS | 9,491,824 | 9,492,453 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr19 | 9,324,341 | 9,382,617 | Link |
CDS sequence
ATGGCTGCAGGGTGGCTGACAACCTGGTCACAGAACTCAGTAACCTTCCAGGAAGTGGCAGTGGACTTTTCCCAGGAGGAGTGGGCATTGCTGGACCCTGCTCAAAAAAATCTATACAAAGATGTGATGCTGGAGAACTTTAGGAACCTGGCCTCAGTAGGGTATCAGCTCTGCAGACACAGTCTGATCTCCAAGGTGGATCAAGAACAGCTGAAGACAGATGAAAGAGGAATTTTACAAGGTGACTGTGCAGACTGGGAAACTCAACTTAAACCAAAAGATACAATTGCTATGCAGAACATTCCTGGGGGAAAAACATCCAATGGCATAAACACGAACTGTGTCAGAACTCACTCTGGAGAGATGCCCTATGAATGCAGTGACTGTGGGAAAGCCTTCATTTTTCAGTCTTCCCTTAAGAAACACATGAGATCTCATACTGGAGAGAAGCCTTATGAGTGTGATCACTGTGGAAAATCCTTTAGCCAGAGCTCTCATCTGAATGTGCACAAAAGAACTCACACTGGAGAGAAACCCTATGACTGTAAGGAATGTGGGAAGGCTTTCACTGTTCCTTCATCCCTTCAGAAACATGTGAGAACCCACACTGGAGAGAAACCCTATGAATGCAGTGACTGTGGAAAAGCCTTCATCGATCAGTCATCCCTTAAGAAACACACACGCTCTCACACTGGAGAGAAGCCTTATGAGTGTAACCAGTGTGGAAAGTCCTTCAGCACAGGCTCTTACCTTATTGTGCACAAGAGAACTCACACTGGTGAGAAAACCTATGAGTGTAAAGAATGTGGGAAGGCCTTTAGGAATTCCTCTTGCCTGAGGGTACACGTGAGAACTCACACTGGAGAGAAGCCTTATAAATGTATTCAGTGTGAAAAAGCCTTTAGCACAAGCACTAACCTTATAATGCACAAGCGAATCCACAATGGCCAGAAACTCCATGAATGA
Amino sequence
MAAGWLTTWSQNSVTFQEVAVDFSQEEWALLDPAQKNLYKDVMLENFRNLASVGYQLCRHSLISKVDQEQLKTDERGILQGDCADWETQLKPKDTIAMQNIPGGKTSNGINTNCVRTHSGEMPYECSDCGKAFIFQSSLKKHMRSHTGEKPYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHTGEKPYECSDCGKAFIDQSSLKKHTRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHVRTHTGEKPYKCIQCEKAFSTSTNLIMHKRIHNGQKLHE*