ENST00000301475.1 ZNF558
Information
- Transcript ID
- ENST00000301475.1
- Genome
- hg19
- Position
- chr19:8,920,382-8,933,565
- Strand
- -
- CDS length
- 1,209
- Amino acid length
- 403
- Gene symbol
- ZNF558
- Gene type
- protein-coding
- Gene description
- zinc finger protein 558
- Gene Entrez Gene ID
- 148156
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 8,920,382 | 8,922,739 |
| 5 | 8,923,237 | 8,923,319 |
| 4 | 8,923,803 | 8,923,898 |
| 3 | 8,931,856 | 8,931,982 |
| 2 | 8,932,679 | 8,932,767 |
| 1 | 8,933,305 | 8,933,565 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 8,921,957 | 8,922,739 |
| 5 | CDS | 8,923,237 | 8,923,319 |
| 4 | CDS | 8,923,803 | 8,923,898 |
| 3 | CDS | 8,931,856 | 8,931,982 |
| 2 | CDS | 8,932,679 | 8,932,767 |
| 1 | CDS | 8,933,305 | 8,933,335 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 8,809,706 | 8,822,889 | Link |
CDS sequence
ATGGCGGCTGTCATCCTGCCCTCGACTGCTGCTCCGTCTTCCCTGTTCCCAGCCTCTCAGCAAAAAGGACACACACAGGGCGGAGAGCTGGTTAATGAGCTCCTGACAAGCTGGCTACGGGGCTTGGTAACCTTCGAGGATGTGGCCGTGGAGTTCACCCAGGAGGAGTGGGCGTTGCTGGACCCTGCCCAAAGGACACTGTACAGGGATGTGATGCTGGAGAACTGCAGGAACCTGGCCTCACTAGGGTGTCGTGTTAATAAACCCAGTCTGATATCCCAGTTGGAACAAGACAAGAAGGTGGTGACAGAGGAAAGAGGAATTCTACCAAGCACCTGTCCAGATTTGGAGACTCTACTTAAAGCCAAATGGTTAACTCCTAAGAAGAATGTTTTCAGAAAAGAACAGTCTAAAGGTGTAAAAACGGAAAGAAGTCATCGTGGAGTGAAACTCAATGAATGTAATCAGTGTTTTAAAGTCTTCAGCACGAAATCTAACCTAACTCAGCACAAGAGAATTCATACTGGAGAAAAACCCTATGACTGTAGTCAATGTGGGAAGTCCTTCAGTAGCAGATCTTACCTTACTATTCATAAGAGAATCCATAATGGGGAGAAACCCTATGAATGCAATCACTGTGGGAAAGCATTTAGTGATCCCTCATCCCTTAGACTGCATTTGAGAATTCACACTGGAGAAAAACCCTATGAATGTAACCAGTGTTTTCACGTTTTCCGCACCAGTTGTAACCTCAAAAGCCACAAGAGGATTCACACGGGGGAGAATCACCATGAATGTAATCAGTGTGGAAAAGCTTTCAGCACAAGGTCCTCTCTCACTGGGCACAATAGCATTCATACAGGGGAGAAACCTTATGAATGTCACGATTGTGGGAAAACCTTCAGGAAGAGCTCCTATCTGACACAGCACGTAAGAACTCATACTGGAGAAAAACCCTATGAATGTAACGAGTGTGGGAAATCCTTCAGCAGTAGCTTTTCTCTTACTGTGCACAAGAGAATACATACCGGAGAGAAACCCTACGAGTGCAGTGACTGTGGAAAAGCCTTTAATAATCTCTCAGCTGTGAAGAAACACTTAAGAACTCACACTGGAGAAAAACCCTATGAATGTAATCATTGTGGGAAATCCTTCACAAGTAACTCCTATCTTTCTGTGCACAAGAGAATACATAATAGATGGATATGA
Amino sequence
MAAVILPSTAAPSSLFPASQQKGHTQGGELVNELLTSWLRGLVTFEDVAVEFTQEEWALLDPAQRTLYRDVMLENCRNLASLGCRVNKPSLISQLEQDKKVVTEERGILPSTCPDLETLLKAKWLTPKKNVFRKEQSKGVKTERSHRGVKLNECNQCFKVFSTKSNLTQHKRIHTGEKPYDCSQCGKSFSSRSYLTIHKRIHNGEKPYECNHCGKAFSDPSSLRLHLRIHTGEKPYECNQCFHVFRTSCNLKSHKRIHTGENHHECNQCGKAFSTRSSLTGHNSIHTGEKPYECHDCGKTFRKSSYLTQHVRTHTGEKPYECNECGKSFSSSFSLTVHKRIHTGEKPYECSDCGKAFNNLSAVKKHLRTHTGEKPYECNHCGKSFTSNSYLSVHKRIHNRWI*