ENST00000680450.1 CCL25
Information
- Transcript ID
- ENST00000680450.1
- Genome
- hg19
- Position
- chr19:8,117,232-8,127,534
- Strand
- +
- CDS length
- 450
- Amino acid length
- 150
- Gene symbol
- CCL25
- Gene type
- protein-coding
- Gene description
- C-C motif chemokine ligand 25
- Gene Entrez Gene ID
- 6370
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 8,117,232 | 8,117,404 |
| 2 | 8,117,648 | 8,117,706 |
| 3 | 8,117,884 | 8,118,006 |
| 4 | 8,121,036 | 8,121,153 |
| 5 | 8,121,250 | 8,121,383 |
| 6 | 8,122,688 | 8,122,804 |
| 7 | 8,127,102 | 8,127,534 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 8,117,934 | 8,118,006 |
| 4 | CDS | 8,121,036 | 8,121,153 |
| 5 | CDS | 8,121,250 | 8,121,383 |
| 6 | CDS | 8,122,688 | 8,122,804 |
| 7 | CDS | 8,127,102 | 8,127,109 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 8,052,348 | 8,062,650 | Link |
CDS sequence
ATGAACCTGTGGCTCCTGGCCTGCCTGGTGGCCGGCTTCCTGGGAGCCTGGGCCCCCGCTGTCCACACCCAAGGTGTCTTTGAGGACTGCTGCCTGGCCTACCACTACCCCATTGGGTGGGCTGTGCTCCGGCGCGCCTGGACTTACCGGATCCAGGAGGTGAGCGGGAGCTGCAATCTGCCTGCTGCGATATTCTACCTCCCCAAGAGACACAGGAAGGTGTGTGGGAACCCCAAAAGCAGGGAGGTGCAGAGAGCCATGAAGCTCCTGGATGCTCGAAATAAGGTTTTTGCAAAGCTCCACCACAACACGCAGACCTTCCAAGGCCCTCATGCTGTAAAGAAGTTGAGTTCTGGAAACTCCAAGTTATCATCGTCCAAGTTTAGCAATCCCATCAGCAGCAGTAAGAGGAATGTCTCCCTCCTGATATCAGCTAATTCAGGACTGTGA
Amino sequence
MNLWLLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQGPHAVKKLSSGNSKLSSSKFSNPISSSKRNVSLLISANSGL*