ENST00000599689.1 SHD
Information
- Transcript ID
- ENST00000599689.1
- Genome
- hg19
- Position
- chr19:4,279,293-4,290,688
- Strand
- +
- CDS length
- 903
- Amino acid length
- 301
- Gene symbol
- SHD
- Gene type
- protein-coding
- Gene description
- Src homology 2 domain containing transforming protein D
- Gene Entrez Gene ID
- 56961
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,279,293 | 4,280,357 |
| 2 | 4,282,867 | 4,282,972 |
| 3 | 4,283,051 | 4,283,239 |
| 4 | 4,284,778 | 4,284,901 |
| 5 | 4,290,444 | 4,290,688 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 4,280,061 | 4,280,357 |
| 2 | CDS | 4,282,867 | 4,282,972 |
| 3 | CDS | 4,283,051 | 4,283,239 |
| 4 | CDS | 4,284,778 | 4,284,901 |
| 5 | CDS | 4,290,444 | 4,290,630 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 4,279,296 | 4,290,691 | Link |
CDS sequence
ATGGCCAAGTGGCTACGGGACTACCTGAGCTTTGGGGGTCGGAGGCCCCCTCCGCAGCCGCCCACCCCGGACTACACCGAGAGCGACATCCTGAGGGCCTACCGCGCGCAGAAGAACCTGGACTTCGAGGACCCCTATGAGGACGCGGAGAGCCGCTTGGAGCCGGACCCCGCGGGCCCTGGGGACTCCAAGAACCCCGGAGATGCCAAGTATGGTTCTCCCAAGCACCGGCTCATCAAGGTGGAGGCTGCGGATATGGCCAGAGCCAAGGCCCTTCTGGGCGGCCCCGGGGAGGAGCTGGAAGCCGACACTGAGTATTTAGACCCCTTTGATGCTCAGCCTCATCCTGCACCCCCGGATGATGGGTACATGGAGCCCTACGATGCCCAATGGGTCATGAGTGAACTTCCCGGCAGAGGGGTGCAGCTCTATGACACCCCTTATGAGGAACAGGACCCAGAGACAGCAGATGGACCCCCTTCTGGGCAGAAGCCTCGGCAGAGCCGGATGCCCCAGGAAGATGAACGGCCAGCAGATGAGTATGATCAGCCCTGGGAGTGGAAGAAAGACCACATCTCCAGGGCGTTTGCAGTGCAGTTTGACAGTCCAGAGTGGGAGAGGACTCCAGGCTCAGCCAAGGAGCTCCGGAGACCTCCGCCCAGAAGCCCCCAGCCTGCGGAGCGTGTGGACCCAGCCCTGCCCCTGGAGAAACAGCCGAGCAGCCAGGGCTTCCTGCATCTGAAGTTCGCGCGGACCCGTGAGAACCAGGTGGTGCTGGGCCAACACAGCGGGCCCTTCCCCAGCGTGCCCGAGCTCGTCCTCCACTACAGTTCACGCCCACTGCCGGTGCAGGGTGCCGAGCATCTGGCTCTGCTGTACCCCGTGGTCACGCAGACCCCCTGA
Amino sequence
MAKWLRDYLSFGGRRPPPQPPTPDYTESDILRAYRAQKNLDFEDPYEDAESRLEPDPAGPGDSKNPGDAKYGSPKHRLIKVEAADMARAKALLGGPGEELEADTEYLDPFDAQPHPAPPDDGYMEPYDAQWVMSELPGRGVQLYDTPYEEQDPETADGPPSGQKPRQSRMPQEDERPADEYDQPWEWKKDHISRAFAVQFDSPEWERTPGSAKELRRPPPRSPQPAERVDPALPLEKQPSSQGFLHLKFARTRENQVVLGQHSGPFPSVPELVLHYSSRPLPVQGAEHLALLYPVVTQTP*