ENST00000333651.11 HMG20B
Information
- Transcript ID
- ENST00000333651.11
- Genome
- hg19
- Position
- chr19:3,572,942-3,579,081
- Strand
- +
- CDS length
- 954
- Amino acid length
- 318
- Gene symbol
- HMG20B
- Gene type
- protein-coding
- Gene description
- high mobility group 20B
- Gene Entrez Gene ID
- 10362
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 3,572,942 | 3,572,992 |
| 2 | 3,573,290 | 3,573,345 |
| 3 | 3,573,690 | 3,573,798 |
| 4 | 3,574,381 | 3,574,584 |
| 5 | 3,575,538 | 3,575,658 |
| 6 | 3,576,259 | 3,576,305 |
| 7 | 3,576,551 | 3,576,623 |
| 8 | 3,576,890 | 3,577,105 |
| 9 | 3,577,979 | 3,578,111 |
| 10 | 3,578,507 | 3,579,081 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 3,573,308 | 3,573,345 |
| 3 | CDS | 3,573,690 | 3,573,798 |
| 4 | CDS | 3,574,381 | 3,574,584 |
| 5 | CDS | 3,575,538 | 3,575,658 |
| 6 | CDS | 3,576,259 | 3,576,305 |
| 7 | CDS | 3,576,551 | 3,576,623 |
| 8 | CDS | 3,576,890 | 3,577,105 |
| 9 | CDS | 3,577,979 | 3,578,111 |
| 10 | CDS | 3,578,507 | 3,578,519 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 3,572,944 | 3,579,083 | Link |
CDS sequence
ATGTCCCACGGCCCCAAGCAGCCCGGCGCGGCCGCCGCGCCGGCGGGCGGCAAGGCTCCGGGCCAGCATGGGGGCTTCGTGGTGACTGTCAAGCAAGAGCGCGGCGAGGGTCCACGCGCGGGCGAGAAGGGGTCCCACGAGGAGGAGCCGGTGAAGAAACGCGGCTGGCCCAAGGGCAAGAAGCGGAAGAAGATTCTGCCGAATGGGCCCAAGGCACCGGTCACGGGCTACGTGCGCTTCCTGAACGAGCGGCGCGAGCAGATCCGCACGCGCCACCCGGATCTGCCCTTTCCCGAGATCACCAAGATGCTGGGCGCCGAGTGGAGCAAGCTGCAGCCAACGGAAAAGCAGCGGTACCTGGATGAGGCCGAGAGAGAGAAGCAGCAGTACATGAAGGAGCTGCGGGCGTACCAGCAGTCTGAAGCCTATAAGATGTGCACGGAGAAGATCCAGGAGAAGAAGATCAAGAAAGAAGACTCGAGCTCTGGGCTCATGAACACTCTCCTGAATGGACACAAGGGTGGGGACTGCGATGGCTTCTCCACCTTCGATGTTCCCATCTTCACTGAAGAGTTCTTGGACCAAAACAAAGCGCGTGAGGCGGAGCTTCGGCGCTTGCGGAAGATGAATGTGGCCTTCGAGGAGCAGAACGCGGTACTGCAGAGGCACACGCAGAGCATGAGCAGCGCGCGCGAGCGTCTGGAGCAGGAGCTGGCGCTGGAGGAGCGGAGGACGCTGGCGCTGCAGCAGCAGCTCCAGGCCGTGCGCCAGGCGCTCACCGCCAGCTTCGCCTCACTGCCGGTGCCGGGCACGGGCGAAACGCCCACGCTGGGCACTCTGGACTTCTACATGGCCCGGCTTCACGGAGCCATCGAGCGCGACCCCGCCCAGCACGAGAAGCTCATCGTCCGCATCAAGGAAATCCTGGCCCAGGTCGCCAGCGAGCACCTGTGA
Amino sequence
MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL*