ENST00000677562.1 SGTA

Information
Transcript ID
ENST00000677562.1
Genome
hg19
Position
chr19:2,754,733-2,783,325
Strand
-
CDS length
1,083
Amino acid length
361
Gene symbol
SGTA
Gene type
protein-coding
Gene description
small glutamine rich tetratricopeptide repeat co-chaperone alpha
Gene Entrez Gene ID
6449
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 2,754,733 2,755,931
10 2,757,335 2,757,455
9 2,757,691 2,757,780
8 2,761,458 2,761,520
7 2,762,504 2,762,642
6 2,763,651 2,763,755
5 2,765,184 2,765,283
4 2,767,134 2,767,218
3 2,767,578 2,767,684
2 2,768,967 2,769,089
1 2,783,231 2,783,325
CDS
Exon number Type Start Stop
11 CDS 2,755,759 2,755,931
10 CDS 2,757,335 2,757,455
9 CDS 2,757,691 2,757,780
8 CDS 2,761,458 2,761,520
7 CDS 2,762,504 2,762,642
6 CDS 2,763,651 2,763,755
5 CDS 2,765,184 2,765,283
4 CDS 2,767,134 2,767,218
3 CDS 2,767,578 2,767,684
2 CDS 2,768,967 2,769,066
Other genome
Genome Chromosome Start End Links
hg38 chr19 2,754,735 2,783,327 Link
CDS sequence
ATGGACAACAAGAAGCGCCTGGCCTACGCCATCATCCAGTTCCTGCATGACCAGCTCCGGCACGGGGGCCTCTCGTCCGATGCTCAGGAGAGCTTGGAAGTCGCCATCCAGTGCCTGGAGACTGCGTTTGGGGTGACGGTAGAAGACAGTGACCTTGCGCTCCCTCAGACTCTGCCGGAGATATTTGAAGCGGCTGCCACGGGCAAGGAGATGCCGCAGGACCTGAGGAGCCCCGCGCGAACCCCGCCTTCCGAGGAGGACTCAGCAGAGGCAGAGCGCCTCAAAACCGAAGGAAACGAGCAGATGAAAGTGGAAAACTTTGAAGCTGCCGTGCATTTCTACGGAAAAGCCATCGAGCTCAACCCAGCCAACGCCGTCTATTTCTGCAACAGAGCCGCAGCCTACAGCAAACTCGGCAACTACGCAGGCGCGGTGCAGGACTGTGAGCGGGCCATCTGCATTGACCCGGCCTACAGCAAGGCCTACGGCAGGATGGGCCTGGCGCTCTCCAGCCTCAACAAGCACGTGGAGGCCGTGGCTTACTACAAGAAGGCTCTGGAGCTGGACCCCGACAACGAGACATACAAGTCCAACCTCAAGATAGCGGAGCTGAAGCTGCGGGAGGCCCCCAGCCCCACGGGAGGCGTGGGCAGCTTCGACATCGCCGGCCTGCTGAACAACCCTGGCTTCATGAGCATGCATGTCCGGCATGATTTCGGGTGGCAACAACCCCTTGGGAACTCCCGGCACCAGCCCCTCGCAGAACGACCTGGCCAGCCTCATCCAGGCGGGCCAGCAGTTTGCCCAGCAGATGCAGCAGCAGAACCCAGAGTTGATAGAGCAGCTCAGGAGCCAGATCCGGAGTCGGACGCCCAGCGCCAGCAACGACGACCAGCAGGAGTGACGCTGCCTGCTCCCGGTGTGACCGCGTCCTTCCCTGGCCGACCCGAAGGAAGCCTTCTGGTTGTCTGCCACTTCCTCCTGTTGGACTGCCTGAGAGAGGGGAAGAGAGAGACCTCGGACCTGCATGTCAAGATGGATTTTCCCCTTTTATCTCTGCCCTCCTCCACTCCCTTTTTGTAA
Amino sequence
MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMHVRHDFGWQQPLGNSRHQPLAERPGQPHPGGPAVCPADAAAEPRVDRAAQEPDPESDAQRQQRRPAGVTLPAPGVTASFPGRPEGSLLVVCHFLLLDCLREGKRETSDLHVKMDFPLLSLPSSTPFL*