ENST00000198939.6 CHERP

Information
Transcript ID
ENST00000198939.6
Genome
hg38
Position
chr19:16,517,896-16,542,415
Strand
-
CDS length
2,784
Amino acid length
928
Gene symbol
CHERP
Gene type
protein-coding
Gene description
calcium homeostasis endoplasmic reticulum protein
Gene Entrez Gene ID
10523
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
17 16,517,896 16,519,352
16 16,519,621 16,519,715
15 16,520,149 16,520,265
14 16,520,364 16,520,507
13 16,520,826 16,520,912
12 16,521,521 16,521,654
11 16,523,052 16,523,290
10 16,525,242 16,525,677
9 16,528,080 16,528,255
8 16,529,648 16,529,900
7 16,530,585 16,530,674
6 16,530,769 16,530,913
5 16,532,598 16,532,749
4 16,533,011 16,533,148
3 16,535,452 16,535,636
2 16,541,870 16,542,043
1 16,542,354 16,542,415
CDS
Exon number Type Start Stop
17 CDS 16,519,159 16,519,352
16 CDS 16,519,621 16,519,715
15 CDS 16,520,149 16,520,265
14 CDS 16,520,364 16,520,507
13 CDS 16,520,826 16,520,912
12 CDS 16,521,521 16,521,654
11 CDS 16,523,052 16,523,290
10 CDS 16,525,242 16,525,677
9 CDS 16,528,080 16,528,255
8 CDS 16,529,648 16,529,900
7 CDS 16,530,585 16,530,674
6 CDS 16,530,769 16,530,913
5 CDS 16,532,598 16,532,749
4 CDS 16,533,011 16,533,148
3 CDS 16,535,452 16,535,636
2 CDS 16,541,870 16,542,043
1 CDS 16,542,354 16,542,378
Other genome
Genome Chromosome Start End Links
hg19 chr19 16,628,707 16,653,226 Link
CDS sequence
ATGGAGATGCCGCTGCCCCCCGATGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGATGACTATGGAGAAGCAGAAGGACAACCCCAAATTCTCGTTTCTTTTCGGAGGCGAATTCTACAGTTACTACAAGTGCAAGCTGGCGCTGGAGCAGCAGCAGCTCATCTGCAAGCAGCAGACCCCGGAGCTGGAGCCAGCCGCCACCATGCCACCCCTGCCACAGCCCCCGCTGGCCCCCGCCGCGCCCATCCCGCCGGCCCAGGGCGCGCCATCCATGGACGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAGACAGGAGCAAGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTCGGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTTCGAGCTGCGGCTGCACCTCATCTACCTGATCAATGACGTGCTGCACCACTGGGCCCTGACGCGCGGAAAGTCTCTCCCTCACAGCCAGCGCAAGCAGGCCCGGGAGCTGCTGGCCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCCGGCTCCTGCAGCTCTGGGAGAAAAACGGCTACTTCGATGACTCCATCATTCAGCAGCTACAGAGCCCAGCCCTGGGGCTTGGTCAGTACCAGGCCACCCTCATCAACGAGTACTCCTCAGTGGTCCAGCCGGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACCCTCAAGACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCACCGCCTGCTCCACCCCCGGCCCCAGCACCTGCCCCTGCCATCCCGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAGGAGGGGTCCAGGATCCTGCAGCTGCCGGCCCCCGGGGCCCCGGGCCACACGACCAGATCCCACCAAACAAGCCCCCTTGGTTTGACCAGCCTCACCCCGTGGCTCCTTGGGGCCAGCAGCAGCCGCCAGAGCAGCCACCCTACCCGCACCACCAGGGCGGCCCACCCCACTGCCCCCCCTGGAACAACAGCCATGAGGGCATGTGGGGCGAGCAGCGCGGTGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTGGAACAGCCAGTTCGAGGGCCCCTGGAACAGCCAGCACGAGCAGCCGCCCTGGGGCGGGGGCCAGCGCGAGCCACCCTTCCGCATGCAGCGGCCCCCACACTTCCGGGGGCCCTTCCCGCCCCACCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCCACGGCACCCCTTCGAGCGGCCGCCCTATCCCCACCGCTTCGACTACCCCCAGGGGGACTTCCCTGCCGAAATGGGGCCCCCTCACCACCACCCTGGCCACCGCATGCCTCATCCTGGCATCAACGAGCACCCGCCTTGGGCTGGACCCCAGCACCCTGACTTCGGCCCTCCCCCCCATGGCTTCAACGGGCAGCCCCCACACATGCGGCGACAGGGCCCACCCCACATCAACCACGATGACCCCAGCCTGGTCCCCAATGTGCCCTACTTCGATCTCCCTGCTGGGCTGATGGCCCCCCTCGTGAAGCTGGAAGATCACGAGTACAAGCCTTTGGACCCTAAAGACATCCGCCTCCCACCCCCCATGCCGCCCAGCGAGAGGCTGCTGGCTGCAGTGGAGGCCTTCTACAGCCCCCCGTCCCACGACAGGCCCAGGAACAGTGAAGGCTGGGAGCAGAACGGCCTCTATGAGTTCTTCCGAGCAAAAATGCGGGCCCGGCGGAGGAAAGGCCAGGAGAAGAGGAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCTCCCGTTCCTACTCCCGCTCCAGATCTAGAAGTCGGAGCAGGTCGCGCTCCTCCAGAAGCCGCTCCCGGTCCCAGTCGCGGTCCCGGTCCAAGTCGTACTCCCCAGGAAGAAGACGCCGGTCACGGTCCAGGAGCCCCACCCCGCCTTCCTCTGCTGGTCTGGGTTCTAATTCGGCGCCTCCCATCCCTGACTCAAGGCTCGGAGAAGAGAACAAAGGCCATCAGATGCTGGTGAAGATGGGCTGGAGCGGCTCAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTATAAAGGCGTGGGCGTGGCTCTGGATGACCCCTATGAGAACTACCGCAGGAACAAGAGCTACTCCTTCATCGCCCGCATGAAGGCCAGGGACGAGTGTAAGTAG
Amino sequence
MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKLALEQQQLICKQQTPELEPAATMPPLPQPPLAPAAPIPPAQGAPSMDELIQQSQWNLQQQEQHLLALRQEQVTAAVAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPPHCELMAGHLRNRITADGAHFELRLHLIYLINDVLHHWALTRGKSLPHSQRKQARELLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLINEYSSVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDECK*