ENST00000280467.10 SLC5A12
Information
- Transcript ID
- ENST00000280467.10
- Genome
- hg38
- Position
- chr11:26,691,658-26,721,999
- Strand
- -
- CDS length
- 1,191
- Amino acid length
- 397
- Gene symbol
- SLC5A12
- Gene type
- protein-coding
- Gene description
- solute carrier family 5 member 12
- Gene Entrez Gene ID
- 159963
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 26,691,658 | 26,692,601 |
| 8 | 26,697,164 | 26,697,252 |
| 7 | 26,698,406 | 26,698,535 |
| 6 | 26,703,531 | 26,703,671 |
| 5 | 26,703,793 | 26,703,947 |
| 4 | 26,709,312 | 26,709,379 |
| 3 | 26,711,307 | 26,711,358 |
| 2 | 26,712,641 | 26,712,706 |
| 1 | 26,721,376 | 26,721,999 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 26,692,451 | 26,692,601 |
| 8 | CDS | 26,697,164 | 26,697,252 |
| 7 | CDS | 26,698,406 | 26,698,535 |
| 6 | CDS | 26,703,531 | 26,703,671 |
| 5 | CDS | 26,703,793 | 26,703,947 |
| 4 | CDS | 26,709,312 | 26,709,379 |
| 3 | CDS | 26,711,307 | 26,711,358 |
| 2 | CDS | 26,712,641 | 26,712,706 |
| 1 | CDS | 26,721,376 | 26,721,714 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 26,713,205 | 26,743,546 | Link |
CDS sequence
ATGGAGGTGAAGAACTTTGCAGTTTGGGATTATGTTGTATTTGCAGCCCTCTTTTTCATTTCCTCTGGAATTGGGGTGTTCTTTGCCATTAAGGAGAGAAAAAAGGCAACTTCCCGAGAGTTCCTGGTTGGGGGAAGGCAAATGAGCTTTGGCCCTGTCGGCTTGTCTCTGACAGCCAGCTTCATGTCAGCTGTCACGGTCCTGGGGACCCCTTCTGAAGTCTACCGCTTTGGGGCATCCTTCCTAGTCTTCTTCATTGCTTACCTATTTGTCATCCTCTTAACATCAGAGCTCTTTCTCCCTGTGTTCTACAGATCTGGTATCACCAGCACTTATGAGTACTTACAACTACGATTCAACAAACCAGTTCGCTATGCTGCCACGGTCATCTACATTGTACAGACGATTCTCTACACAGGAGTGGTGGTGTATGCTCCTGCCCTGGCACTCAATCAAGTGACTGGGTTTGATCTCTGGGGCTCTGTGTTTGCAACAGGAATTGTTTGCACATTCTACTGTACCCTGGGAGGATTAAAAGCAGTGGTGTGGACAGATGCATTTCAGATGGTTGTCATGATTGTGGGCTTCTTAACGGTTCTCATTCAAGGATCAACTCATGCTGGGGGATTCCACAATGTATTAGAGCAATCAACAAATGGATCTCGACTACATATATTTGACTTTGATGTAGATCCTCTCAGGCGACACACTTTTTGGACTATCACAGTGGGAGGAACTTTTACTTGGCTCGGAATCTATGGGGTCAATCAATCAACTATTCAGCGATGCATCTCTTGCAAAACAGAAAAGCATGCTAAGCTTGCCTTGTATTTTAACTTGCTGGGTCTCTGGATCATTCTGGTGTGTGCTGTCTTCTCTGGCTTAATCATGTACTCTCACTTTAAAGACTGTGACCCTTGGACTTCTGGCATCATCTCAGCACCAGACCAGCTGATGCCGTACTTTGTCATGGAGATATTTGCCACAATGCCAGGACTGCCAGGACTTTTTGTGGCTTGTGCCTTCAGTGGAACTCTGAGCACCGTGGCTTCCAGCATCAATGCCTTGGCAACAGTGACCTTTGAGGATTTTGTCAAGAGCTGTTTTCCTCATCTCTCCGACAAGCTGAGCACCTGGATCAGTAAAGGCTTATGTAGGTACAGCTGGTGGACTTTCTATTCCATATCATGA
Amino sequence
MEVKNFAVWDYVVFAALFFISSGIGVFFAIKERKKATSREFLVGGRQMSFGPVGLSLTASFMSAVTVLGTPSEVYRFGASFLVFFIAYLFVILLTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWGSVFATGIVCTFYCTLGGLKAVVWTDAFQMVVMIVGFLTVLIQGSTHAGGFHNVLEQSTNGSRLHIFDFDVDPLRRHTFWTITVGGTFTWLGIYGVNQSTIQRCISCKTEKHAKLALYFNLLGLWIILVCAVFSGLIMYSHFKDCDPWTSGIISAPDQLMPYFVMEIFATMPGLPGLFVACAFSGTLSTVASSINALATVTFEDFVKSCFPHLSDKLSTWISKGLCRYSWWTFYSIS*