ENST00000238497.10 VPS4B

Information
Transcript ID
ENST00000238497.10
Genome
hg19
Position
chr18:61,056,423-61,089,709
Strand
-
CDS length
1,335
Amino acid length
445
Gene symbol
VPS4B
Gene type
protein-coding
Gene description
vacuolar protein sorting 4 homolog B
Gene Entrez Gene ID
9525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 61,056,423 61,058,309
10 61,060,642 61,060,782
9 61,064,267 61,064,486
8 61,066,475 61,066,556
7 61,067,281 61,067,429
6 61,067,780 61,067,936
5 61,070,940 61,071,059
4 61,074,665 61,074,732
3 61,077,523 61,077,679
2 61,078,700 61,078,811
1 61,089,466 61,089,709
CDS
Exon number Type Start Stop
11 CDS 61,058,208 61,058,309
10 CDS 61,060,642 61,060,782
9 CDS 61,064,267 61,064,486
8 CDS 61,066,475 61,066,556
7 CDS 61,067,281 61,067,429
6 CDS 61,067,780 61,067,936
5 CDS 61,070,940 61,071,059
4 CDS 61,074,665 61,074,732
3 CDS 61,077,523 61,077,679
2 CDS 61,078,700 61,078,811
1 CDS 61,089,466 61,089,492
Other genome
Genome Chromosome Start End Links
hg38 chr18 63,389,190 63,422,476 Link
CDS sequence
ATGTCATCCACTTCGCCCAACCTCCAGAAAGCGATAGATCTGGCTAGCAAAGCAGCGCAAGAAGACAAGGCTGGGAACTACGAAGAAGCCCTTCAGCTCTATCAGCATGCTGTGCAGTATTTTCTTCATGTCGTTAAATATGAAGCACAGGGTGATAAAGCCAAGCAAAGTATCAGGGCAAAGTGTACAGAATATCTTGATAGAGCAGAAAAACTAAAGGAGTACCTGAAAAATAAAGAGAAAAAAGCACAGAAGCCAGTGAAAGAAGGACAGCCGAGTCCAGCAGATGAGAAGGGGAATGACAGTGATGGGGAAGGAGAATCTGATGATCCTGAAAAAAAGAAACTACAGAATCAACTTCAAGGTGCCATTGTTATAGAACGACCAAATGTGAAATGGAGTGACGTTGCTGGACTTGAAGGAGCCAAAGAAGCACTGAAAGAGGCTGTGATACTGCCTATTAAATTTCCTCATCTTTTTACAGGCAAGAGAACACCTTGGAGGGGAATCCTATTATTTGGGCCGCCTGGAACAGGAAAGTCCTACTTAGCCAAAGCTGTAGCAACAGAAGCCAACAACTCAACATTTTTTTCAATATCTTCCTCTGATCTTGTTTCTAAGTGGCTAGGTGAAAGTGAAAAACTGGTTAAGAATTTATTCCAACTTGCCAGAGAGAACAAGCCCTCCATTATCTTCATTGATGAAATTGATTCTCTCTGTGGTTCAAGAAGTGAAAATGAAAGTGAAGCCGCACGTAGAATTAAGACGGAGTTCCTAGTGCAAATGCAAGGGGTTGGTGTAGACAATGATGGAATTTTGGTTCTGGGAGCTACAAATATACCCTGGGTTCTGGATTCTGCCATTAGGCGAAGATTTGAGAAACGAATTTATATTCCCTTGCCGGAACCCCATGCCCGAGCAGCAATGTTTAAACTGCACCTAGGGACCACTCAGAACAGTCTCACGGAAGCAGACTTTCGGGAACTTGGGAGGAAAACAGATGGTTATTCAGGGGCAGATATAAGTATCATTGTACGTGATGCCCTTATGCAGCCTGTTAGGAAAGTACAGTCAGCTACTCATTTTAAAAAGGTTCGCGGACCTTCCCGAGCTGATCCTAACCATCTTGTAGATGATCTGCTAACACCTTGCTCTCCAGGTGACCCTGGTGCCATTGAAATGACATGGATGGATGTCCCTGGAGATAAACTTTTGGAGCCAGTTGTTTCCATGTCGGATATGTTGCGGTCACTATCTAACACAAAACCTACAGTCAATGAACATGACTTGTTGAAATTAAAGAAGTTTACAGAAGATTTTGGTCAAGAAGGCTAA
Amino sequence
MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG*