ENST00000620245.4 SKOR2

Information
Transcript ID
ENST00000620245.4
Genome
hg19
Position
chr18:44,738,460-44,775,554
Strand
-
CDS length
3,048
Amino acid length
1,016
Gene symbol
SKOR2
Gene type
protein-coding
Gene description
SKI family transcriptional corepressor 2
Gene Entrez Gene ID
652991
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 44,738,460 44,738,522
6 44,746,314 44,746,381
5 44,756,830 44,756,928
4 44,757,306 44,757,371
3 44,771,279 44,771,353
2 44,771,869 44,771,932
1 44,772,942 44,775,554
CDS
Exon number Type Start Stop
7 CDS 44,738,460 44,738,522
6 CDS 44,746,314 44,746,381
5 CDS 44,756,830 44,756,928
4 CDS 44,757,306 44,757,371
3 CDS 44,771,279 44,771,353
2 CDS 44,771,869 44,771,932
1 CDS 44,772,942 44,775,554
Other genome
Genome Chromosome Start End Links
hg38 chr18 47,212,089 47,249,183 Link
CDS sequence
ATGGCTTCCAGTCCGCTGCCAGGGCCCAACGACATCCTGCTGGCGTCGCCGTCGAGCGCCTTCCAGCCCGACACGCTGAGCCAGCCGCGGCCAGGGCACGCCAACCTCAAACCCAACCAGGTGGGCCAGGTGATCCTCTACGGCATTCCCATCGTGTCGTTGGTGATCGACGGGCAAGAGCGCCTGTGCCTGGCGCAGATCTCCAACACTCTGCTCAAGAACTTCAGCTACAACGAGATCCACAACCGTCGCGTGGCACTGGGCATCACGTGTGTGCAGTGCACGCCGGTGCAACTGGAGATCCTGCGGCGTGCCGGGGCCATGCCCATCTCATCGCGCCGCTGCGGCATGATCACCAAACGCGAGGCCGAGCGTCTGTGCAAGTCGTTCCTGGGCGAAAACAGGCCGCCCAAGCTGCCAGACAATTTCGCCTTCGACGTGTCACACGAGTGCGCCTGGGGCTGCCGCGGCAGCTTCATTCCCGCGCGCTACAACAGCTCGCGCGCCAAGTGCATCAAATGCAGCTACTGCAACATGTACTTCTCGCCCAACAAGTTCATTTTCCACTCCCACCGCACGCCCGACGCCAAGTACACTCAGCCAGACGCAGCCAACTTCAACTCGTGGCGCCGTCATCTCAAGCTCACCGACAAGAGTCCCCAGGACGAGCTGGTCTTCGCCTGGGAGGACGTCAAGGCCATGTTCAACGGCGGCAGCCGCAAGCGCGCACTGCCCCAGCCGGGCGCGCACCCCGCCTGCCACCCGCTCAGCTCTGTGAAGGCGGCCGCCGTGGCCGCCGCGGCCGCGGTGGCCGGAGGCGGGGGTCTGCTGGGCCCCCACCTGCTGGGTGCGCCCCCGCCGCCGCCGCCGCCACCGCCGCCCTTGGCAGAGCTGGCTGGTGCCCCGCACGCCCATCACAAGCGGCCGCGCTTCGACGACGACGACGACTCCTTGCAGGAGGCCGCCGTAGTGGCCGCCGCCAGCCTCTCGGCCGCAGCCGCCAGCCTCTCTGTGGCTGCTGCTTCGGGCGGCGCGGGGACTGGTGGGGGCGGCGCTGGGGGTGGCTGTGTGGCCGGCGTGGGCGTGGGCGCGGGCGCGGGGGCGGGTGCCGGGGCAGGGGCCAAAGGCCCGCGCAGCTACCCAGTCATCCCGGTGCCCAGCAAGGGCTCGTTCGGGGGCGTCCTGCAGAAGTTCCCGGGCTGCGGCGGGCTCTTCCCGCACCCCTACACCTTCCCTGCCGCGGCCGCCGCCTTCAGCTTGTGCCATAAGAAAGAGGATGCGGGTGCCGCCGCTGAGGCCCTGGGGGGCGCGGGCGCAGGCGGCGCGGGCGCGGCGCCCAAGGCCGGCTTGTCCGGCCTCTTCTGGCCCGCGGGCCGCAAGGACGCCTTCTATCCGCCCTTCTGCATGTTCTGGCCGCCGCGGACCCCTGGCGGGCTCCCGGTGCCCACCTACCTGCAGCCCCCGCCTCAGCCGCCCTCGGCGCTAGGCTGCGCGCTAGGCGAAAGCCCGGCCCTGCTGCGCCAGGCCTTCCTGGACCTGGCTGAGCCAGGCGGTGCTGCTGGGAGCGCCGAGGCCGCGCCCCCGCCGGGGCAGCCCCCGCAGGTAGTGGCCAACGGCCCGGGCTCCGGCCCACCTCCTCCTGCCGGGGGCGCCGGCTCTCGCGACGCGCTCTTCGAGTCGCCCCCGGGCGGCAGCGGCGGGGACTGCAGCGCGGGCTCCACGCCGCCCGCGGACTCTGTGGCAGCTGCCGGGGCAGGGGCCGCGGCCGCCGGGTCTGGCCCCGCGGGCTCCCGGGTTCCGGCGCCCCACCATCCGCACCTTCTGGAGGGGCGCAAAGCGGGCGGTGGCAGCTACCACCATTCCAGCGCCTTCCGGCCAGTGGGCGGCAAGGACGACGCGGAGAGCCTGGCCAAGCTGCACGGGGCGTCGGCGGGCGCGCCCCACTCGGCCCAGACGCATCCCCACCACCATCACCACCCTCACCACCACCACCACCACCACCACCCCCCGCAGCCGCCGTCGCCGCTTCTGCTGCTGCCCCCGCAGCCCGACGAGCCGGGTTCCGAGCGCCACCACCCGGCCCCGCCGCCGCCGCCGCCGCCGCCCCCGCCGCCCCCTCTGGCCCAGCACCCGCACCACCGAGGCCTTCTGTCTCCCGGGGGAACCAGCTGCTGCTACCCCAGCGAGGACAGCTCCGAGGACGAGGACGACGAGGAAGAAGAGCAGGAGGTGGACGTGGAGGGCCACAAGCCCCCCGAGGGCGAGGAAGAGGAGGAAGGTCGAGACCCTGACGACGACGAGGAAGAGGACGAGGAGACGGAGGTCCTACTCGGCGACCCCTTAGTCGGGGGCGGCCGGTTCCTCCAGGGCCGAGGGCCGTCGGAGAAGGGGAGCAGCCGGGACCGCGCGCCGGCCGTCGCGGGCGCGTTCCCGCTCGGCCTGAACTCCTCCAGGCTGCTGCAGGAAGACGGGAAACTCGGGGACCCCGGCTCGGACCTGCCCCCGCCCCCGCCGCCGCCCCTGGCCCCCCAGAAGGCGAGTGGCGGCGGCAGCAGCAGCCCGGGCAGCCCAGTTCACCATCCATCACTGGAGGAGCAGCCCTCCTACAAAGATAGTCAGAAAACTAAGGAAAATAACCAAGTAATTGTATCTACAAAGGATGACAACAGCTTTTCAGATAAGAACAAGGAGCATAGCTTTTTCATCACAGACTCTGATGCTTCTGGAGGAGATTTTTGGAGAGAAAGATCAGGTGAACATACACAAGAAACCAACTCACCTCATTCACTGAAAAAGGATGTAGAAAATATGGGGAAAGAAGAACTTCAGAAGGTTTTATTTGAACAAATAGATTTACGGAGACGACTGGAACAAGAATTCCAGGTGTTAAAAGGAAACACATCTTTCCCAGTATTCAATAATTTTCAGGATCAGATGAAAAGGGAGCTAGCCTACCGAGAAGAAATGGTGCAACAGTTACAAATTATCCCCTATGCAGCAAGTTTGATCAGGAAAGAAAAGCTTGGCGCCCATCTCAGCAAAAGCTAA
Amino sequence
MASSPLPGPNDILLASPSSAFQPDTLSQPRPGHANLKPNQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDNFAFDVSHECAWGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRHLKLTDKSPQDELVFAWEDVKAMFNGGSRKRALPQPGAHPACHPLSSVKAAAVAAAAAVAGGGGLLGPHLLGAPPPPPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGGVLQKFPGCGGLFPHPYTFPAAAAAFSLCHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPPRTPGGLPVPTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCCYPSEDSSEDEDDEEEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEETEVLLGDPLVGGGRFLQGRGPSEKGSSRDRAPAVAGAFPLGLNSSRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDKNKEHSFFITDSDASGGDFWRERSGEHTQETNSPHSLKKDVENMGKEELQKVLFEQIDLRRRLEQEFQVLKGNTSFPVFNNFQDQMKRELAYREEMVQQLQIIPYAASLIRKEKLGAHLSKS*