ENST00000625705.1 NPLOC4

Information
Transcript ID
ENST00000625705.1
Genome
hg19
Position
chr17:79,575,827-79,596,901
Strand
-
CDS length
405
Amino acid length
135
Gene symbol
NPLOC4
Gene type
protein-coding
Gene description
NPL4 homolog, ubiquitin recognition factor
Gene Entrez Gene ID
55666
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 79,575,827 79,575,848
4 79,580,344 79,580,520
3 79,589,192 79,589,304
2 79,596,751 79,596,831
1 79,596,890 79,596,901
CDS
Exon number Type Start Stop
5 CDS 79,575,827 79,575,848
4 CDS 79,580,344 79,580,520
3 CDS 79,589,192 79,589,304
2 CDS 79,596,751 79,596,831
1 CDS 79,596,890 79,596,901
Other genome
Genome Chromosome Start End Links
hg38 chr17 81,608,801 81,629,875 Link
CDS sequence
ATGGAAGCCGTAATAATTCGTGTCCAGTCCCCGGATGGAGTGAAGCGGATCACAGCAACAAAGAGAGAAACAGCAGCAACATTTTTGAAAAAGGTTGCAAAGGAGTTTGGCTTCCAAAATAATGGCTTCTCGGTTTACATCAATAGAAACAAGACCGGAGAGATAACAGCCTCCTCCAACAAATCCCTCAACTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCTGTTTCCCTCGAGCCTTGCTGGGCCCTCATCTGAAATGGAGACGTCAGTTCCACCGGGCTTCAAAGTCTTTGGCGCTCCCAACGTGGTGGAGGATGAGATTGATCAGTACCTCAGCAAACAGGACGGGAAGATTTACAGAAGCCGAGACCCACAGCTCCATTCGATGAGGACTATCTAA
Amino sequence
MEAVIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLNLLKIKHGDLLFLFPSSLAGPSSEMETSVPPGFKVFGAPNVVEDEIDQYLSKQDGKIYRSRDPQLHSMRTI*