ENST00000637878.2 PVALEF
Information
- Transcript ID
- ENST00000637878.2
- Genome
- hg19
- Position
- chr17:79,139,307-79,156,966
- Strand
- +
- CDS length
- 405
- Amino acid length
- 135
- Gene symbol
- PVALEF
- Gene type
- protein-coding
- Gene description
- parvalbumin like EF-hand containing
- Gene Entrez Gene ID
- 388428
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 79,139,307 | 79,139,547 |
| 2 | 79,140,477 | 79,140,644 |
| 3 | 79,152,718 | 79,152,952 |
| 4 | 79,154,923 | 79,155,132 |
| 5 | 79,155,359 | 79,155,494 |
| 6 | 79,155,766 | 79,155,881 |
| 7 | 79,156,765 | 79,156,966 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 79,155,027 | 79,155,132 |
| 5 | CDS | 79,155,359 | 79,155,494 |
| 6 | CDS | 79,155,766 | 79,155,881 |
| 7 | CDS | 79,156,765 | 79,156,811 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 81,165,507 | 81,183,166 | Link |
CDS sequence
ATGGAGGAGGACTTCTCCTCCCAGATGAAGAAGATGGCCTTGGCCATGGGCACGTCCCTATCAGACAAGGACATTGAGCTGCTGCCCACAGACATGAGACACCACGGGTCCTTCAACTACCTCAAGTTCTTCAAGCACATCCGCAAGCTCCACGCCTCGGGCCAGCTGGACGACGCCATCCACACGGCCTTCCAGTCCCTGGACAAGGACAAGAGTGGCTTCATTGAGTGGAACGAGATCAAGTACATCCTGTCCATCATCCCCAGCAGCGGGCCCACCACCCCGCTGACAGACGAGGAGGCCGAGGCCATGATCCAGGCGGCAGACACACACGGGGACGGGAGGATCAACTACGAAGAATTTTCTGAATTGATCAAAAAGGAGAAAATTCCAAAGAAGAAGTAG
Amino sequence
MEEDFSSQMKKMALAMGTSLSDKDIELLPTDMRHHGSFNYLKFFKHIRKLHASGQLDDAIHTAFQSLDKDKSGFIEWNEIKYILSIIPSSGPTTPLTDEEAEAMIQAADTHGDGRINYEEFSELIKKEKIPKKK*