ENST00000269318.9 CCDC40

Information
Transcript ID
ENST00000269318.9
Genome
hg19
Position
chr17:78,010,451-78,041,700
Strand
+
CDS length
1,740
Amino acid length
580
Gene symbol
CCDC40
Gene type
protein-coding
Gene description
coiled-coil domain 40 molecular ruler complex subunit
Gene Entrez Gene ID
55036
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 78,010,451 78,010,490
2 78,011,922 78,011,985
3 78,013,611 78,014,069
4 78,021,078 78,021,201
5 78,022,382 78,022,560
6 78,023,705 78,023,788
7 78,023,863 78,024,082
8 78,032,293 78,032,450
9 78,032,657 78,032,779
10 78,039,284 78,039,405
11 78,041,304 78,041,700
CDS
Exon number Type Start Stop
1 CDS 78,010,462 78,010,490
2 CDS 78,011,922 78,011,985
3 CDS 78,013,611 78,014,069
4 CDS 78,021,078 78,021,201
5 CDS 78,022,382 78,022,560
6 CDS 78,023,705 78,023,788
7 CDS 78,023,863 78,024,082
8 CDS 78,032,293 78,032,450
9 CDS 78,032,657 78,032,779
10 CDS 78,039,284 78,039,405
11 CDS 78,041,304 78,041,481
Other genome
Genome Chromosome Start End Links
hg38 chr17 80,036,652 80,067,901 Link
CDS sequence
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATGCTGAAAGCGAAGAGGAATATTACTATACAGAAACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACTTACCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAGGACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGGATTTTAAGGAAAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGCGTGTCCCTAGAGCGCTTCCCAAGTCAAAATATAAACACCGCTCGTTCCCGCCTTTCTACCACATGGCATTCCGCTGGGATACTTCTACGGGGAAGCTTCCTGCCCGGGGCATCGAGGGCGTTCGCGTCCGTCTGTTATGGCGGTGCTGCTGTAGATAACCGGATCCGCGAATGCTAA
Amino sequence
MAEPGGAAGRSHPEDGSASEGEKEGNNESHMVSPPEKDDGQKGEEAVGSTEHPEEVTTQAEAAIEEGEVETEGEAAVEGEEEAVSYGDAESEEEYYYTETSSPEGQISAADTTYPYFSPPQELPGEEAYDSVSGEAGLQGFQQEATGPPESRERRVTSPEPSHGVLGPSEQMGQVTSGPAVGRLTGSTEEPQGQVLPMGVQHRFRLSHGSDIESSDLEEFVSQEPVIPPGVPDAHPREGDLPVFQDQIQQPSTEEGAMAERVESEGSDEEAEDEGSQLVVLDPDHPLMVRFQAALKNYLNRQIEKLKLDLQELVVATKQSRAQRQELGVNLYEVQQHLVHLQKLLEKSHDRHAMASSERRQKEEELQAARALYTKTCAAANEERKKLAALQTEMENLALHLFYMQNIDQDMRDDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQLTTRAQQLEEDIALFEAQYLAQAEDTRILRKAVSEACTEIDAISVEKRRIMQQWASSLVGMKHRDEAHRAVLEALSVSLERFPSQNINTARSRLSTTWHSAGILLRGSFLPGASRAFASVCYGGAAVDNRIREC*